RNA–Protein interactions for RNA: ENST00000558509.5

IDH3A-205, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 4

Gene IDH3A, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-205ENST00000558509 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
IDH3A-205ENST00000558509 EOMESO95936 686 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 FDPSP14324 419 aaKnown RBP16.67■□□□□ 0.26
IDH3A-205ENST00000558509 PPM1AP35813 382 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 NR5A1Q13285 461 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 TWF2Q6IBS0 349 aaKnown RBP16.67■□□□□ 0.26
IDH3A-205ENST00000558509 PIK3AP1Q6ZUJ8 805 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
IDH3A-205ENST00000558509 MRPL43Q8N983 215 aaKnown RBP16.67■□□□□ 0.26
IDH3A-205ENST00000558509 TNFRSF25Q93038 417 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 TMEM143Q96AN5 459 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 TRAIPQ9BWF2 469 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 ZBP1Q9H171 429 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 SMOC2Q9H3U7 446 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 NGRNQ9NPE2 291 aaKnown RBP16.67■□□□□ 0.26
IDH3A-205ENST00000558509 FAM105AQ9NUU6 356 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 TBC1D13Q9NVG8 400 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 INPP5FQ9Y2H2 1132 aa16.67■□□□□ 0.26
IDH3A-205ENST00000558509 PFKFB2O60825 505 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 OFD1O75665 1012 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 EPCAMP16422 314 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 SFPQP23246 707 aaKnown RBP eCLIP16.66■□□□□ 0.26
IDH3A-205ENST00000558509 SLC11A1P49279 550 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 SMC1AQ14683 1233 aaKnown RBP16.66■□□□□ 0.26
IDH3A-205ENST00000558509 GALNT17Q6IS24 598 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 AGMOQ6ZNB7 445 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 ZNF410Q86VK4 478 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 ZNF280BQ86YH2 543 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 NECAB1Q8N987 351 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 ASIC4Q96FT7 647 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 DYDC2Q96IM9 177 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 LXNQ9BS40 222 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 POMKQ9H5K3 350 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
IDH3A-205ENST00000558509 XPNPEP1Q9NQW7 623 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 CHST12Q9NRB3 414 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 AGPAT5Q9NUQ2 364 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 DACT1Q9NYF0 836 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 PUF60Q9UHX1 559 aaKnown RBP16.66■□□□□ 0.26
IDH3A-205ENST00000558509 COL4A3BPQ9Y5P4 624 aa16.66■□□□□ 0.26
IDH3A-205ENST00000558509 CCDC194A0A1B0GVG4 234 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 CCNT1O60563 726 aaKnown RBP16.65■□□□□ 0.26
IDH3A-205ENST00000558509 DDHD2O94830 711 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 PDGFBP01127 241 aaPredicted RBP16.65■□□□□ 0.26
IDH3A-205ENST00000558509 QARSP47897 775 aaKnown RBP16.65■□□□□ 0.26
IDH3A-205ENST00000558509 AK2P54819 239 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 VCPP55072 806 aaKnown RBP16.65■□□□□ 0.26
IDH3A-205ENST00000558509 ST3GAL1Q11201 340 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 CATSPER4Q7RTX7 472 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 VPS52Q8N1B4 723 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 ZNF710Q8N1W2 664 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 PRPF31Q8WWY3 499 aaKnown RBP16.65■□□□□ 0.26
IDH3A-205ENST00000558509 MRPL9Q9BYD2 267 aaKnown RBP16.65■□□□□ 0.26
IDH3A-205ENST00000558509 GBP3Q9H0R5 595 aa16.65■□□□□ 0.26
IDH3A-205ENST00000558509 USP34Q70CQ2 3546 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 C2CD4DB7Z1M9 353 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 GALTP07902 379 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 HOXA11P31270 313 aaPredicted RBP16.64■□□□□ 0.25
IDH3A-205ENST00000558509 FOSBP53539 338 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 CYP4A11Q02928 519 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 KRT17Q04695 432 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.25
IDH3A-205ENST00000558509 PTPN21Q16825 1174 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 NCAPH2Q6IBW4 605 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 IGSF21Q96ID5 467 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 CEP170P1Q96L14 293 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
IDH3A-205ENST00000558509 PCDHB2Q9Y5E7 798 aa16.64■□□□□ 0.25
IDH3A-205ENST00000558509 A0A087WWV3 80 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.63■□□□□ 0.25
IDH3A-205ENST00000558509 F8W810 466 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 JAK2O60674 1132 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 ZNF623O75123 536 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 CXCL14O95715 111 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 P4HBP07237 508 aaKnown RBP16.63■□□□□ 0.25
IDH3A-205ENST00000558509 SRGAP2CP0DJJ0 459 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 CA8P35219 290 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 MRE11P49959 708 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 DNM2P50570 870 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 LAMTOR4Q0VGL1 99 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 EMC2Q15006 297 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
IDH3A-205ENST00000558509 CPLX2Q6PUV4 134 aaKnown RBP16.63■□□□□ 0.25
IDH3A-205ENST00000558509 FAM177A1Q8N128 213 aaPredicted RBP16.63■□□□□ 0.25
IDH3A-205ENST00000558509 SLC22A17Q8WUG5 538 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 CASP10Q92851 521 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 PBXIP1Q96AQ6 731 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 TMEM169Q96HH4 297 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 FAM20AQ96MK3 541 aa16.63■□□□□ 0.25
IDH3A-205ENST00000558509 ORC3Q9UBD5 711 aaPredicted RBP16.63■□□□□ 0.25
IDH3A-205ENST00000558509 CACNA1HO95180 2353 aa16.62■□□□□ 0.25
IDH3A-205ENST00000558509 CTSAP10619 480 aa16.62■□□□□ 0.25
IDH3A-205ENST00000558509 YWHABP31946 246 aaKnown RBP16.62■□□□□ 0.25
IDH3A-205ENST00000558509 ALDH7A1P49419 539 aaKnown RBP16.62■□□□□ 0.25
IDH3A-205ENST00000558509 POLGP54098 1239 aaPredicted RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms