RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 ADAM2Q99965 735 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 PYM1Q9BRP8 204 aaKnown RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 NTPCRQ9BSD7 190 aaKnown RBP13.3□□□□□ -0.28
CDK12-203ENST00000558240 CUEDC2Q9H467 287 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 DACT1Q9NYF0 836 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 ODF2LQ9ULJ1 636 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 PCDHA11Q9Y5I1 949 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 CHD7Q9P2D1 2997 aa13.3□□□□□ -0.28
CDK12-203ENST00000558240 C9IYK1 514 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 INO80B-WBP1J3KQ70 363 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 AXLP30530 894 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 NPTX2P47972 431 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 SARSP49591 514 aaKnown RBP13.29□□□□□ -0.28
CDK12-203ENST00000558240 FXR1P51114 621 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDK12-203ENST00000558240 EFNA5P52803 228 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 FAM189BP81408 668 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
CDK12-203ENST00000558240 GIT2Q14161 759 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 RAB30Q15771 203 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 E2F4Q16254 413 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 FAM187BQ17R55 369 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 CRIPAKQ8N1N5 446 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 DEPTORQ8TB45 409 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 SPIRE2Q8WWL2 714 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
CDK12-203ENST00000558240 RAD9AQ99638 391 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 REEP2Q9BRK0 252 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 PBX4Q9BYU1 374 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 FZD8Q9H461 694 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 POLD4Q9HCU8 107 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 AGPAT5Q9NUQ2 364 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 MSRAQ9UJ68 235 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 KCNH3Q9ULD8 1083 aa13.29□□□□□ -0.28
CDK12-203ENST00000558240 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 A0A0U1RQF3 1178 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 A0A1W2PQ27 194 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 A0A1W2PQ64 194 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 A0A1W2PQD8 194 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 SFI1A8K8P3 1242 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 TLL1O43897 1013 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 ERLIN2O94905 339 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 STAG3L1P0CL83 205 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 PLS3P13797 630 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 HOXA11P31270 313 aaPredicted RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 ZNF131P52739 623 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 RABGGTBP53611 331 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 SMTNP53814 917 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 PEX3P56589 373 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 HTRA4P83105 476 aaPredicted RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 AMHR2Q16671 573 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 NPAS4Q8IUM7 802 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 DHX58Q96C10 678 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 PRIMPOLQ96LW4 560 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 LRRC27Q9C0I9 530 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 TNMDQ9H2S6 317 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 ELAC1Q9H777 363 aaKnown RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 MAGEF1Q9HAY2 307 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 PRMT7Q9NVM4 692 aaPredicted RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 LARSQ9P2J5 1176 aaKnown RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 PIN4Q9Y237 131 aaKnown RBP13.28□□□□□ -0.28
CDK12-203ENST00000558240 INSL6Q9Y581 213 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 PHLPP2Q6ZVD8 1323 aa13.28□□□□□ -0.28
CDK12-203ENST00000558240 CDH23Q9H251 3354 aa13.27□□□□□ -0.28
CDK12-203ENST00000558240 TMEM265A0A087WTH1 108 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 FAM237AA0A1B0GTK4 181 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 MYMKA6NI61 221 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 TSPAN1O60635 241 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 FAM13AO94988 1023 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 UPP2O95045 317 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 SKIP12755 728 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 SCP2P22307 547 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 DNAJB2P25686 324 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 PBX2P40425 430 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 AMPD3Q01432 767 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 MAPK6Q16659 721 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 TWF2Q6IBS0 349 aaKnown RBP13.27□□□□□ -0.29
CDK12-203ENST00000558240 TMCO2Q7Z6W1 182 aaPredicted RBP13.27□□□□□ -0.29
CDK12-203ENST00000558240 KCNN1Q92952 543 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 CCDC51Q96ER9 411 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 LRCH3Q96II8 777 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 CCDC113Q9H0I3 377 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 TMEM134Q9H6X4 195 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 PARVGQ9HBI0 331 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 GDPD2Q9HCC8 539 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 KMT5AQ9NQR1 393 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 ARHGAP28Q9P2N2 729 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 HPSEQ9Y251 543 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 PCDHB7Q9Y5E2 793 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 TRANK1O15050 2925 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
CDK12-203ENST00000558240 A0A1B0GVL5 298 aa13.26□□□□□ -0.29
CDK12-203ENST00000558240 H0YCG3 227 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms