RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 ZBTB39O15060 712 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 TBX3O15119 743 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 ZNF623O75123 536 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 CDKL5O76039 1030 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 P4HBP07237 508 aaKnown RBP18.31■□□□□ 0.52
RPL28-205ENST00000558131 GCFC2P16383 781 aaKnown RBP18.31■□□□□ 0.52
RPL28-205ENST00000558131 DNM2P50570 870 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 AFF1P51825 1210 aaKnown RBP18.31■□□□□ 0.52
RPL28-205ENST00000558131 AK2P54819 239 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 ZXDAP98168 799 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 NR5A1Q13285 461 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 LONRF3Q496Y0 759 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 UBXN11Q5T124 520 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 TWF2Q6IBS0 349 aaKnown RBP18.31■□□□□ 0.52
RPL28-205ENST00000558131 TMC7Q7Z402 723 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 BMP8AQ7Z5Y6 402 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 FEZF2Q8TBJ5 459 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 RPGRIP1Q96KN7 1286 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 FBXL18Q96ME1 805 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 APOL5Q9BWW9 433 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 SLKQ9H2G2 1235 aaPredicted RBP18.31■□□□□ 0.52
RPL28-205ENST00000558131 NRDE2Q9H7Z3 1164 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 DNAJB4Q9UDY4 337 aa18.31■□□□□ 0.52
RPL28-205ENST00000558131 CCNT1O60563 726 aaKnown RBP18.3■□□□□ 0.52
RPL28-205ENST00000558131 CLASP2O75122 1294 aaKnown RBP18.3■□□□□ 0.52
RPL28-205ENST00000558131 ZC3H11AO75152 810 aaKnown RBP eCLIP18.3■□□□□ 0.52
RPL28-205ENST00000558131 OFD1O75665 1012 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 HOXA11P31270 313 aaPredicted RBP18.3■□□□□ 0.52
RPL28-205ENST00000558131 KRT17Q04695 432 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 SMC1AQ14683 1233 aaKnown RBP18.3■□□□□ 0.52
RPL28-205ENST00000558131 AGMOQ6ZNB7 445 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 TRIM67Q6ZTA4 783 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 C4orf19Q8IY42 314 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 XPNPEP1Q9NQW7 623 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 BMP2KQ9NSY1 1161 aaPredicted RBP18.3■□□□□ 0.52
RPL28-205ENST00000558131 RGL1Q9NZL6 768 aa18.3■□□□□ 0.52
RPL28-205ENST00000558131 GALTP07902 379 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 ANAPC15P60006 121 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 NHLH1Q02575 133 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 EPHA7Q15375 998 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 CATSPER4Q7RTX7 472 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 PRPF31Q8WWY3 499 aaKnown RBP18.29■□□□□ 0.52
RPL28-205ENST00000558131 AUTS2Q8WXX7 1259 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 SLC7A3Q8WY07 619 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 RSPH1Q8WYR4 309 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 TMEM143Q96AN5 459 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 ASIC4Q96FT7 647 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 IGSF21Q96ID5 467 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 DYDC2Q96IM9 177 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 CEP170P1Q96L14 293 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 JPH2Q9BR39 696 aaPredicted RBP18.29■□□□□ 0.52
RPL28-205ENST00000558131 INO80BQ9C086 356 aaPredicted RBP18.29■□□□□ 0.52
RPL28-205ENST00000558131 KCNH6Q9H252 994 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 IRAK3Q9Y616 596 aa18.29■□□□□ 0.52
RPL28-205ENST00000558131 TMEM221A6NGB7 291 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 M0R296 226 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 SRGAP2BP0DMP2 458 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 HOXB8P17481 243 aaPredicted RBP18.28■□□□□ 0.52
RPL28-205ENST00000558131 YWHABP31946 246 aaKnown RBP18.28■□□□□ 0.52
RPL28-205ENST00000558131 RFC5P40937 340 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 SLC11A1P49279 550 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 RAB27AP51159 221 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 LAMTOR4Q0VGL1 99 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 EMC2Q15006 297 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 ME3Q16798 604 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 NOMO2Q5JPE7 1267 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 MRPL10Q7Z7H8 261 aaKnown RBP18.28■□□□□ 0.52
RPL28-205ENST00000558131 ZNF280BQ86YH2 543 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 VPS52Q8N1B4 723 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 CASP10Q92851 521 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 GTF3C6Q969F1 213 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 POMKQ9H5K3 350 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 ORC3Q9UBD5 711 aaPredicted RBP18.28■□□□□ 0.52
RPL28-205ENST00000558131 PPME1Q9Y570 386 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 PCDHB2Q9Y5E7 798 aa18.28■□□□□ 0.52
RPL28-205ENST00000558131 DDHD2O94830 711 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 CTSAP10619 480 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 SKIP12755 728 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 ALDH7A1P49419 539 aaKnown RBP18.27■□□□□ 0.52
RPL28-205ENST00000558131 POLGP54098 1239 aaPredicted RBP18.27■□□□□ 0.52
RPL28-205ENST00000558131 CYP4A11Q02928 519 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 CTTNQ14247 550 aaKnown RBP18.27■□□□□ 0.52
RPL28-205ENST00000558131 PTPN21Q16825 1174 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 NCAPH2Q6IBW4 605 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 GLB1LQ6UWU2 654 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 DDX53Q86TM3 631 aaKnown RBP18.27■□□□□ 0.52
RPL28-205ENST00000558131 FERMT3Q86UX7 667 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 NSUN7Q8NE18 718 aaKnown RBP18.27■□□□□ 0.52
RPL28-205ENST00000558131 PRSS33Q8NF86 280 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 PSPC1Q8WXF1 523 aaKnown RBP18.27■□□□□ 0.52
RPL28-205ENST00000558131 TMEM169Q96HH4 297 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 INPP5FQ9Y2H2 1132 aa18.27■□□□□ 0.52
RPL28-205ENST00000558131 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.26■□□□□ 0.51
RPL28-205ENST00000558131 DKC1O60832 514 aaKnown RBP eCLIP18.26■□□□□ 0.51
RPL28-205ENST00000558131 SLITRK3O94933 977 aa18.26■□□□□ 0.51
RPL28-205ENST00000558131 XBP1P17861 261 aa18.26■□□□□ 0.51
RPL28-205ENST00000558131 SP100P23497 879 aaPredicted RBP18.26■□□□□ 0.51
RPL28-205ENST00000558131 SIGLEC14Q08ET2 396 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms