RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 FAM126AQ9BYI3 521 aaPredicted RBP11.79□□□□□ -0.52
TRAV33-201ENST00000557514 ZNF302Q9NR11 478 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 RCAN3Q9UKA8 241 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 AKT3Q9Y243 479 aa11.79□□□□□ -0.52
TRAV33-201ENST00000557514 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
TRAV33-201ENST00000557514 LOC400499M0QZD8 3231 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 MEIS3P2A8K0S8 358 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 IFIT3O14879 490 aaKnown RBP11.78□□□□□ -0.52
TRAV33-201ENST00000557514 URODP06132 367 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 TDGF1P13385 188 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 FGFR4P22455 802 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 SMARCA1P28370 1054 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 GPC3P51654 580 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 LAIR1Q6GTX8 287 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 TSSK4Q6SA08 328 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
TRAV33-201ENST00000557514 CATIPQ7Z7H3 387 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 DDX1Q92499 740 aaKnown RBP11.78□□□□□ -0.52
TRAV33-201ENST00000557514 FGF14Q92915 247 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 LPPQ93052 612 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 RPP25Q9BUL9 199 aaKnown RBP11.78□□□□□ -0.52
TRAV33-201ENST00000557514 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 ZDHHC7Q9NXF8 308 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 CEP131Q9UPN4 1083 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 INPP5FQ9Y2H2 1132 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 MAFBQ9Y5Q3 323 aaPredicted RBP11.78□□□□□ -0.52
TRAV33-201ENST00000557514 ZFP37Q9Y6Q3 630 aaPredicted RBP11.78□□□□□ -0.52
TRAV33-201ENST00000557514 COL4A3Q01955 1670 aa11.78□□□□□ -0.52
TRAV33-201ENST00000557514 BAZ2BQ9UIF8 2168 aaKnown RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 ERICH2A1L162 156 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 FAM170BA6NMN3 283 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 DDX39AO00148 427 aaKnown RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 MEIS1O00470 390 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 MAGEB2O15479 319 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 SOD2P04179 222 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 PROS1P07225 676 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 RETP07949 1114 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 TARSP26639 723 aaKnown RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 KIF5BP33176 963 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 RPS9P46781 194 aaKnown RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 RNASELQ05823 741 aaKnown RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 ANKRD45Q5TZF3 282 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 MIS18BP1Q6P0N0 1132 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 PARM1Q6UWI2 310 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 PRR23CQ6ZRP0 262 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 ZNF280BQ86YH2 543 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 RNF168Q8IYW5 571 aaPredicted RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 LRRC71Q8N4P6 559 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 ST13P5Q8NFI4 369 aaPredicted RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 HDAC7Q8WUI4 952 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 RILPL2Q969X0 211 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 ZNF668Q96K58 619 aaPredicted RBP11.77□□□□□ -0.53
TRAV33-201ENST00000557514 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 RXFP1Q9HBX9 757 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 CHST12Q9NRB3 414 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 MARCH5Q9NX47 278 aa11.77□□□□□ -0.53
TRAV33-201ENST00000557514 C2orf16Q68DN1 1984 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 DOCK8Q8NF50 2099 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 C2CD2LO14523 706 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 DHX15O43143 795 aaKnown RBP11.76□□□□□ -0.53
TRAV33-201ENST00000557514 OFD1O75665 1012 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 DDAH1O94760 285 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 PLEKHA8P1O95397 391 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 EFEMP2O95967 443 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 C1RP00736 705 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 TMOD1P28289 359 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 AK2P54819 239 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 TRDNQ13061 729 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 SLC44A4Q53GD3 710 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 SWSAP1Q6NVH7 229 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 CKAP2LQ8IYA6 745 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 CTCFLQ8NI51 663 aaPredicted RBP11.76□□□□□ -0.53
TRAV33-201ENST00000557514 PHKBQ93100 1093 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 COL26A1Q96A83 441 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 TMEM175Q9BSA9 504 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 GBP3Q9H0R5 595 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 DIAPH3Q9NSV4 1193 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 SEMA4GQ9NTN9 838 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 ZBTB47Q9UFB7 747 aaPredicted RBP11.76□□□□□ -0.53
TRAV33-201ENST00000557514 RAB23Q9ULC3 237 aa11.76□□□□□ -0.53
TRAV33-201ENST00000557514 FREM2Q5SZK8 3169 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 ZNF623O75123 536 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 MYBP10242 640 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 SKIP12755 728 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 CD72P21854 359 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 RAB27AP51159 221 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 PFKPQ01813 784 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 MTAPQ13126 283 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 SART3Q15020 963 aaKnown RBP11.75□□□□□ -0.53
TRAV33-201ENST00000557514 CSRP2Q16527 193 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 LPAL2Q16609 132 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 LONRF3Q496Y0 759 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 ZBTB41Q5SVQ8 909 aa11.75□□□□□ -0.53
TRAV33-201ENST00000557514 N4BP2L1Q5TBK1 243 aaPredicted RBP11.75□□□□□ -0.53
TRAV33-201ENST00000557514 TWF2Q6IBS0 349 aaKnown RBP11.75□□□□□ -0.53
TRAV33-201ENST00000557514 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms