RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 CATSPER4Q7RTX7 472 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 NPAS4Q8IUM7 802 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 C4orf32Q8N8J7 132 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 IGSF22Q8N9C0 903 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 TMEM143Q96AN5 459 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 IFT74Q96LB3 600 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 AK8Q96MA6 479 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 FDXACB1Q9BRP7 624 aaPredicted RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 SEMA6BQ9H3T3 888 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 DHX33Q9H6R0 707 aaKnown RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 DDX19AQ9NUU7 478 aaKnown RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 DACT1Q9NYF0 836 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 WRAP73Q9P2S5 460 aaPredicted RBP9.25□□□□□ -0.93
PSEN1-223ENST00000557511 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
PSEN1-223ENST00000557511 ENPP3O14638 875 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 HOXA2O43364 376 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 SSBP05455 408 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-223ENST00000557511 CA3P07451 260 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 SRGAP2CP0DJJ0 459 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 SPATA31C1P0DKV0 1188 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 CEBPZQ03701 1054 aaKnown RBP9.24□□□□□ -0.93
PSEN1-223ENST00000557511 LAMTOR4Q0VGL1 99 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 RESTQ13127 1097 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 PPP2R5AQ15172 486 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 STK38Q15208 465 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 PCBP1Q15365 356 aaKnown RBP eCLIP9.24□□□□□ -0.93
PSEN1-223ENST00000557511 TMEM132AQ24JP5 1023 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 SLC24A5Q71RS6 500 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 Q7L0L9 218 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 MAEAQ7L5Y9 396 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 SRGAP1Q7Z6B7 1085 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 CABP7Q86V35 215 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 FAM228AQ86W67 206 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 ZBTB8OSQ8IWT0 167 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 ABI1Q8IZP0 508 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 FIBCD1Q8N539 461 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 LINC01465Q8N7H1 131 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 RNF149Q8NC42 400 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 PRPF31Q8WWY3 499 aaKnown RBP9.24□□□□□ -0.93
PSEN1-223ENST00000557511 TOP1MTQ969P6 601 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 ZNF668Q96K58 619 aaPredicted RBP9.24□□□□□ -0.93
PSEN1-223ENST00000557511 SAMD11Q96NU1 681 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 ADAM2Q99965 735 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 ADAMTS10Q9H324 1103 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 AGO3Q9H9G7 860 aaKnown RBP9.24□□□□□ -0.93
PSEN1-223ENST00000557511 ERVK-5Q9HDB9 667 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 CHST12Q9NRB3 414 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 CCDC39Q9UFE4 941 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 KCNG1Q9UIX4 513 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 MTMR6Q9Y217 621 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 RWDD3Q9Y3V2 267 aa9.24□□□□□ -0.93
PSEN1-223ENST00000557511 MYH9P35579 1960 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 LRRIQ4A6NIV6 560 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 INO80B-WBP1J3KQ70 363 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 TRIM66O15016 1216 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 ZBTB39O15060 712 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 EYA4O95677 639 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 ZSCAN22P10073 491 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 FOSL2P15408 326 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 GCGRP47871 477 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 SARSP49591 514 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 BTG3Q14201 252 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 SPOUT1Q5T280 376 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 FOXD4L5Q5VV16 416 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 TWF2Q6IBS0 349 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 HACE1Q8IYU2 909 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 KIFAP3Q92845 792 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 TGS1Q96RS0 853 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 CEP89Q96ST8 783 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 POLR3FQ9H1D9 316 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 C2orf40Q9H1Z8 148 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 BHMT2Q9H2M3 363 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 MTMR10Q9NXD2 777 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 PIN4Q9Y237 131 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 ATP6V1DQ9Y5K8 247 aa9.23□□□□□ -0.93
PSEN1-223ENST00000557511 TRIP12Q14669 1992 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-223ENST00000557511 A0A087WWV3 80 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 PP2D1A8MPX8 630 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 KRT18P05783 430 aaKnown RBP9.22□□□□□ -0.93
PSEN1-223ENST00000557511 MYOGP15173 224 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 CYP11B2P19099 503 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 IGFBP4P22692 258 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 MARCKSP29966 332 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-223ENST00000557511 AXLP30530 894 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 RAB27AP51159 221 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 POU5F1BQ06416 359 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 DRP2Q13474 957 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 TCTN1Q2MV58 587 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 BLOC1S3Q6QNY0 202 aa9.22□□□□□ -0.93
PSEN1-223ENST00000557511 APBB1IPQ7Z5R6 666 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-223ENST00000557511 TMCO2Q7Z6W1 182 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms