RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 GINS2Q9Y248 185 aa6.68□□□□□ -1.34
VPS33B-207ENST00000557470 NOC2LQ9Y3T9 749 aaKnown RBP6.68□□□□□ -1.34
VPS33B-207ENST00000557470 FRYLO94915 3013 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 FNDC1Q4ZHG4 1894 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 SMIM35A0A1B0GVV1 85 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 C2CD4DB7Z1M9 353 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 C9IYK1 514 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 RPS6KA5O75582 802 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 PLEKHA8P1O95397 391 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 RECKO95980 971 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 HOXB8P17481 243 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 LAG3P18627 525 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 PBX3P40426 434 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 STAT5BP51692 787 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 ACTR2P61160 394 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 NUCB1Q02818 461 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 PTH1RQ03431 593 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 SART3Q15020 963 aaKnown RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 ZNF662Q6ZS27 426 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 SLC24A5Q71RS6 500 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 PLPPR4Q7Z2D5 763 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 FRMD5Q7Z6J6 570 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 RALYLQ86SE5 291 aaKnown RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 UBALD2Q8IYN6 164 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 KIAA0319LQ8IZA0 1049 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 ZNF654Q8IZM8 581 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 CMTR1Q8N1G2 835 aaKnown RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 NME8Q8N427 588 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 SRBD1Q8N5C6 995 aaKnown RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 CTCFLQ8NI51 663 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 CYP2W1Q8TAV3 490 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 IGDCC4Q8TDY8 1250 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 STK32AQ8WU08 396 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 MRPS27Q92552 414 aaKnown RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 PPP1R16BQ96T49 567 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 TCF25Q9BQ70 676 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 POMKQ9H5K3 350 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 JADE2Q9NQC1 790 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 RGS18Q9NS28 235 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 KCNH7Q9NS40 1196 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 C1orf112Q9NSG2 853 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 ST3GAL5Q9UNP4 418 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 SORCS3Q9UPU3 1222 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 LZTS1Q9Y250 596 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 TMA7Q9Y2S6 64 aaKnown RBP6.67□□□□□ -1.34
VPS33B-207ENST00000557470 NR2E1Q9Y466 385 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 LOXHD1Q8IVV2 1947 aa6.67□□□□□ -1.34
VPS33B-207ENST00000557470 EP300Q09472 2414 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 hCG_1642624A0A1W2PR95 340 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 SPDYE3A6NKU9 549 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ZBTB42B2RXF5 422 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 E7EWF7 191 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 CAPN5O15484 640 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 MAFGO15525 162 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ATP9BO43861 1147 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 DDAH1O94760 285 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ASGR2P07307 311 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 WEE2P0C1S8 567 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ARP10275 920 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 KLRC1P26715 233 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 KIF5BP33176 963 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 FAM189BP81408 668 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 PLCB3Q01970 1234 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ITGB3BPQ13352 177 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 KIZQ2M2Z5 673 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 KCNT2Q6UVM3 1135 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 TREML4Q6UXN2 200 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 LRRC55Q6ZSA7 311 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 TRIM46Q7Z4K8 759 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 MB21D2Q8IYB1 491 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 NCOA7Q8NI08 942 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 CASP10Q92851 521 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 TNPO1Q92973 898 aaKnown RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 NKD2Q969F2 451 aaPredicted RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 CASD1Q96PB1 797 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 MAP3K14Q99558 947 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 OSMRQ99650 979 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 MXRA8Q9BRK3 442 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM117Q9H0C3 514 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ADAM7Q9H2U9 754 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ATP6V0A4Q9HBG4 840 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 LY9Q9HBG7 655 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 NGRNQ9NPE2 291 aaKnown RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 RNF19AQ9NV58 838 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 TMEM161AQ9NX61 479 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 PUF60Q9UHX1 559 aaKnown RBP6.66□□□□□ -1.34
VPS33B-207ENST00000557470 ZMIZ1Q9ULJ6 1067 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 PCDHA6Q9UN73 950 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 PCDHA8Q9Y5H6 950 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 HCFC2Q9Y5Z7 792 aa6.66□□□□□ -1.34
VPS33B-207ENST00000557470 NCOR2Q9Y618 2525 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 IGKV6D-21A0A0A0MT36 114 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 C2orf71A6NGG8 1288 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 GPR182O15218 404 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 CLASP2O75122 1294 aaKnown RBP6.65□□□□□ -1.34
VPS33B-207ENST00000557470 GPR32O75388 356 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 C22orf31O95567 290 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 CCNE2O96020 404 aa6.65□□□□□ -1.34
VPS33B-207ENST00000557470 IGHDP01880 384 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms