RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 ZNF852Q6ZMS4 543 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 CEP68Q76N32 757 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 PROSER1Q86XN7 944 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 FTSJ3Q8IY81 847 aaKnown RBP10.82□□□□□ -0.68
NEDD1-211ENST00000557454 TTC14Q96N46 770 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 NDRG2Q9UN36 371 aaKnown RBP10.82□□□□□ -0.68
NEDD1-211ENST00000557454 MYH15Q9Y2K3 1946 aa10.82□□□□□ -0.68
NEDD1-211ENST00000557454 F5P12259 2224 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 KALRNO60229 2985 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 C2CD2LO14523 706 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 HYAL3O43820 417 aaPredicted RBP10.81□□□□□ -0.68
NEDD1-211ENST00000557454 ATP9AO75110 1047 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 RAB11FIP3O75154 756 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 GLUD1P00367 558 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 KCNA2P16389 499 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 SH3PXD2AQ5TCZ1 1133 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 TSHZ3Q63HK5 1081 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 HEATR6Q6AI08 1181 aaKnown RBP10.81□□□□□ -0.68
NEDD1-211ENST00000557454 ELMSAN1Q6PJG2 1045 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 KIAA0319LQ8IZA0 1049 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 GLIS3Q8NEA6 775 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 KXD1Q9BQD3 176 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 PKD2L1Q9P0L9 805 aa10.81□□□□□ -0.68
NEDD1-211ENST00000557454 MRPS17Q9Y2R5 130 aaKnown RBP10.81□□□□□ -0.68
NEDD1-211ENST00000557454 PRB1P04280 392 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ADH1AP07327 375 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 GALTP07902 379 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 SPATA31D3P0C874 917 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 FSHRP23945 695 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 CNR2P34972 360 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 SLC11A1P49279 550 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 AK2P54819 239 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ASPRV1Q53RT3 343 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 VPS53Q5VIR6 699 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 LARP1BQ659C4 914 aaKnown RBP10.8□□□□□ -0.68
NEDD1-211ENST00000557454 TCEAL6Q6IPX3 200 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 MAMSTRQ6ZN01 415 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 SPATA31D4Q6ZUB0 917 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 MTSS1LQ765P7 747 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ZNF598Q86UK7 904 aaKnown RBP10.8□□□□□ -0.68
NEDD1-211ENST00000557454 SAMD3Q8N6K7 520 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 GIMAP8Q8ND71 665 aaPredicted RBP10.8□□□□□ -0.68
NEDD1-211ENST00000557454 PNMA1Q8ND90 353 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 TCEAL3Q969E4 200 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 NT5C3AQ9H0P0 336 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 MRPL17Q9NRX2 175 aaKnown RBP10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ECHDC1Q9NTX5 307 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 KLK13Q9UKR3 277 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 CDH7Q9ULB5 785 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ZFP37Q9Y6Q3 630 aaPredicted RBP10.8□□□□□ -0.68
NEDD1-211ENST00000557454 GREB1Q4ZG55 1949 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 ASXL3Q9C0F0 2248 aa10.8□□□□□ -0.68
NEDD1-211ENST00000557454 USP9XQ93008 2570 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-211ENST00000557454 SPTA1P02549 2419 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 ZNF462Q96JM2 2506 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 ZNF316A6NFI3 1004 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-211ENST00000557454 TRIM6-TRIM34B2RNG4 842 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 TEX28O15482 410 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 B4GALT3O60512 393 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 EPN2O95208 641 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 PAPLNO95428 1278 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 ZSCAN20P17040 1043 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-211ENST00000557454 KLRC1P26715 233 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 CXCL12P48061 93 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 CRYBB1P53674 252 aaPredicted RBP10.79□□□□□ -0.68
NEDD1-211ENST00000557454 TROAPQ12815 778 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 ZMYM1Q5SVZ6 1142 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 LONP2Q86WA8 852 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 IER2Q9BTL4 223 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 EDEM2Q9BV94 578 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 PHF20Q9BVI0 1012 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 GBP3Q9H0R5 595 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 AZI2Q9H6S1 392 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 NRDE2Q9H7Z3 1164 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 DPP7Q9UHL4 492 aa10.79□□□□□ -0.68
NEDD1-211ENST00000557454 C4orf47A7E2U8 309 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 ZBTB5O15062 677 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 SEC24BO95487 1268 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 VTNP04004 478 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 URODP06132 367 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 PARP1P09874 1014 aaKnown RBP10.78□□□□□ -0.68
NEDD1-211ENST00000557454 PSEN1P49768 467 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 NTHL1P78549 312 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 C19orf57Q0VDD7 668 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 PDAP1Q13442 181 aaKnown RBP10.78□□□□□ -0.68
NEDD1-211ENST00000557454 PLA2G2CQ5R387 149 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 NLRX1Q86UT6 975 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 TNPO1Q92973 898 aaKnown RBP10.78□□□□□ -0.68
NEDD1-211ENST00000557454 HNRNPABQ99729 332 aaKnown RBP10.78□□□□□ -0.68
NEDD1-211ENST00000557454 PRKD2Q9BZL6 878 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 TBC1D13Q9NVG8 400 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 INPP5FQ9Y2H2 1132 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 MSRB2Q9Y3D2 182 aa10.78□□□□□ -0.68
NEDD1-211ENST00000557454 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
NEDD1-211ENST00000557454 CARNS1A5YM72 827 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms