RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 FAM105AQ9NUU6 356 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 SPG21Q9NZD8 308 aa15.84■□□□□ 0.13
SNX6-210ENST00000557341 CARNS1A5YM72 827 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 PRR33A8MZF0 331 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 CYP4A11Q02928 519 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 EMC2Q15006 297 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 CALCRLQ16602 461 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 GLB1LQ6UWU2 654 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 DIS3L2Q8IYB7 885 aaKnown RBP15.83■□□□□ 0.12
SNX6-210ENST00000557341 SLC39A11Q8N1S5 342 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 ZNF579Q8NAF0 562 aaKnown RBP15.83■□□□□ 0.12
SNX6-210ENST00000557341 NGRNQ9NPE2 291 aaKnown RBP15.83■□□□□ 0.12
SNX6-210ENST00000557341 RGL1Q9NZL6 768 aa15.83■□□□□ 0.12
SNX6-210ENST00000557341 C2orf16Q68DN1 1984 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 BTBD18B2RXH4 712 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 NEMFO60524 1076 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 JAK2O60674 1132 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 ALDH7A1P49419 539 aaKnown RBP15.82■□□□□ 0.12
SNX6-210ENST00000557341 FOSBP53539 338 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 BCAR1P56945 870 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 CTTNQ14247 550 aaKnown RBP15.82■□□□□ 0.12
SNX6-210ENST00000557341 XKR9Q5GH70 373 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 TMC7Q7Z402 723 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 SRGAP1Q7Z6B7 1085 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 VN1R2Q8NFZ6 395 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 PRPF31Q8WWY3 499 aaKnown RBP15.82■□□□□ 0.12
SNX6-210ENST00000557341 LPPQ93052 612 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 TMEM143Q96AN5 459 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 TMEM169Q96HH4 297 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 MTRQ99707 1265 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 PCDHA12Q9UN75 941 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 USP15Q9Y4E8 981 aaPredicted RBP15.82■□□□□ 0.12
SNX6-210ENST00000557341 WDFY4Q6ZS81 3184 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 PLXNA3P51805 1871 aa15.82■□□□□ 0.12
SNX6-210ENST00000557341 HIDE1A8MVS5 230 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 ZNF623O75123 536 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 ZC3H11AO75152 810 aaKnown RBP eCLIP15.81■□□□□ 0.12
SNX6-210ENST00000557341 SRGAP2CP0DJJ0 459 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 PLA2G5P39877 138 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 RBM10P98175 930 aaKnown RBP15.81■□□□□ 0.12
SNX6-210ENST00000557341 LAMTOR4Q0VGL1 99 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 SMC1AQ14683 1233 aaKnown RBP15.81■□□□□ 0.12
SNX6-210ENST00000557341 TPH2Q8IWU9 490 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 KMT2EQ8IZD2 1858 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 PGBD4Q96DM1 585 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 CCDC43Q96MW1 224 aaKnown RBP15.81■□□□□ 0.12
SNX6-210ENST00000557341 EIF2AK1Q9BQI3 630 aaKnown RBP15.81■□□□□ 0.12
SNX6-210ENST00000557341 TTC12Q9H892 705 aaPredicted RBP15.81■□□□□ 0.12
SNX6-210ENST00000557341 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
SNX6-210ENST00000557341 ARIH1Q9Y4X5 557 aaPredicted RBP15.81■□□□□ 0.12
SNX6-210ENST00000557341 ZNF318Q5VUA4 2279 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 ASAP2O43150 1006 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 ERLIN2O94905 339 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 RNASELQ05823 741 aaKnown RBP15.8■□□□□ 0.12
SNX6-210ENST00000557341 ST3GAL1Q11201 340 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 KCNC3Q14003 757 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 BMS1Q14692 1282 aaKnown RBP15.8■□□□□ 0.12
SNX6-210ENST00000557341 LONRF3Q496Y0 759 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 NOMO2Q5JPE7 1267 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 TMEM184AQ6ZMB5 413 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 FERMT3Q86UX7 667 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 RNF135Q8IUD6 432 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 RNF149Q8NC42 400 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 FAM122AQ96E09 287 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 TBC1D13Q9NVG8 400 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 MUTYHQ9UIF7 546 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 PCDHB2Q9Y5E7 798 aa15.8■□□□□ 0.12
SNX6-210ENST00000557341 MTCL1Q9Y4B5 1905 aaKnown RBP15.8■□□□□ 0.12
SNX6-210ENST00000557341 TECTAO75443 2155 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 CNTNAP2Q9UHC6 1331 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 MYH11P35749 1972 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 MEIS3P2A8K0S8 358 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 NT5C1B-RDH14C9J2C7 533 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 WNT7AO00755 349 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 ZBTB39O15060 712 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 SLITRK3O94933 977 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 LYPLA2O95372 231 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 SEC24BO95487 1268 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 CA8P35219 290 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 TECP42680 631 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 TXKP42681 527 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 MXD4Q14582 209 aaPredicted RBP15.79■□□□□ 0.12
SNX6-210ENST00000557341 PCBP1Q15365 356 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■■■■■ 73.5
SNX6-210ENST00000557341 SAFBQ15424 915 aaKnown RBP eCLIP15.79■□□□□ 0.12
SNX6-210ENST00000557341 HERC4Q5GLZ8 1057 aaPredicted RBP15.79■□□□□ 0.12
SNX6-210ENST00000557341 ANKRD54Q6NXT1 300 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 LLGL2Q6P1M3 1020 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 URGCPQ8TCY9 931 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 PHF7Q9BWX1 381 aaPredicted RBP15.79■□□□□ 0.12
SNX6-210ENST00000557341 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
SNX6-210ENST00000557341 C2orf71A6NGG8 1288 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 LOC730098B7Z3J9 87 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 OFD1O75665 1012 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 DGAT1O75907 488 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 TFDP1Q14186 410 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 TMEM173Q86WV6 379 aaPredicted RBP15.78■□□□□ 0.12
SNX6-210ENST00000557341 MRPL43Q8N983 215 aaKnown RBP15.78■□□□□ 0.12
SNX6-210ENST00000557341 SUSD6Q92537 303 aa15.78■□□□□ 0.12
SNX6-210ENST00000557341 CASP10Q92851 521 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms