RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 GPRC5CQ9NQ84 441 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 AGPAT5Q9NUQ2 364 aa18.41■□□□□ 0.54
VSX1-207ENST00000557285 MUC3AQ02505 3323 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 MEIS3P2A8K0S8 358 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 INO80B-WBP1J3KQ70 363 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 ASAP2O43150 1006 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 FGF18O76093 207 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 ERLIN2O94905 339 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 LAG3P18627 525 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 CCT6AP40227 531 aaKnown RBP18.4■□□□□ 0.54
VSX1-207ENST00000557285 HYAL1Q12794 435 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 CAPSQ13938 189 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 TFDP1Q14186 410 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 MXD4Q14582 209 aaPredicted RBP18.4■□□□□ 0.54
VSX1-207ENST00000557285 CLUL1Q15846 466 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 RBM23Q86U06 439 aaKnown RBP18.4■□□□□ 0.54
VSX1-207ENST00000557285 ZNF598Q86UK7 904 aaKnown RBP18.4■□□□□ 0.54
VSX1-207ENST00000557285 C4orf32Q8N8J7 132 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 MICAL1Q8TDZ2 1067 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 POLR3CQ9BUI4 534 aaPredicted RBP18.4■□□□□ 0.54
VSX1-207ENST00000557285 FAM105AQ9NUU6 356 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 LRWD1Q9UFC0 647 aa18.4■□□□□ 0.54
VSX1-207ENST00000557285 TNFRSF10AO00220 468 aa18.39■□□□□ 0.53
VSX1-207ENST00000557285 EOMESO95936 686 aa18.39■□□□□ 0.53
VSX1-207ENST00000557285 ADGRD2Q7Z7M1 963 aa18.39■□□□□ 0.53
VSX1-207ENST00000557285 CPB2Q96IY4 423 aa18.39■□□□□ 0.53
VSX1-207ENST00000557285 NACC1Q96RE7 527 aa18.39■□□□□ 0.53
VSX1-207ENST00000557285 PCDHB2Q9Y5E7 798 aa18.39■□□□□ 0.53
VSX1-207ENST00000557285 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.38■□□□□ 0.53
VSX1-207ENST00000557285 ARHGEF35A5YM69 484 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 LRRIQ4A6NIV6 560 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 PP2D1A8MPX8 630 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 LINC01565O15544 149 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 SKIP12755 728 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 GLRA2P23416 452 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 RPA1P27694 616 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 ARL2P36404 184 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 FXR2P51116 673 aaKnown RBP eCLIP18.38■□□□□ 0.53
VSX1-207ENST00000557285 ECM1Q16610 540 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 HAUS3Q68CZ6 603 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 KCNT2Q6UVM3 1135 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 SNX29Q8TEQ0 813 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 PABPC5Q96DU9 382 aaKnown RBP18.38■□□□□ 0.53
VSX1-207ENST00000557285 ZNF558Q96NG5 402 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 GBP3Q9H0R5 595 aa18.38■□□□□ 0.53
VSX1-207ENST00000557285 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.38■□□□□ 0.53
VSX1-207ENST00000557285 NT5C1B-RDH14C9J2C7 533 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 TSPAN1O60635 241 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 ZC3H11AO75152 810 aaKnown RBP eCLIP18.37■□□□□ 0.53
VSX1-207ENST00000557285 XRCC6P12956 609 aaKnown RBP eCLIP18.37■□□□□ 0.53
VSX1-207ENST00000557285 NRIP1P48552 1158 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 RAB27AP51159 221 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 PTENP60484 403 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 RNASELQ05823 741 aaKnown RBP18.37■□□□□ 0.53
VSX1-207ENST00000557285 ZRSR1Q15695 479 aaKnown RBP18.37■□□□□ 0.53
VSX1-207ENST00000557285 LEXMQ3ZCV2 418 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 PLPP4Q5VZY2 271 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 PTCRAQ6ISU1 281 aaPredicted RBP18.37■□□□□ 0.53
VSX1-207ENST00000557285 PADI6Q6TGC4 694 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 GLB1LQ6UWU2 654 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.37■□□□□ 0.53
VSX1-207ENST00000557285 PPP2R3CQ969Q6 453 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 TLR9Q9NR96 1032 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 DBR1Q9UK59 544 aaKnown RBP18.37■□□□□ 0.53
VSX1-207ENST00000557285 KIAA1024Q9UPX6 916 aa18.37■□□□□ 0.53
VSX1-207ENST00000557285 PER2O15055 1255 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 LIG1P18858 919 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 CDC25AP30304 524 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 HOXA11P31270 313 aaPredicted RBP18.36■□□□□ 0.53
VSX1-207ENST00000557285 CA8P35219 290 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 ERVFC1P60507 584 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 MBTD1Q05BQ5 628 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 UBXN11Q5T124 520 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
VSX1-207ENST00000557285 PGBD4Q96DM1 585 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 APOL6Q9BWW8 343 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 EIF2AQ9BY44 585 aaKnown RBP18.36■□□□□ 0.53
VSX1-207ENST00000557285 MRPL9Q9BYD2 267 aaKnown RBP18.36■□□□□ 0.53
VSX1-207ENST00000557285 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 RAB34Q9BZG1 259 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 ENTPD7Q9NQZ7 604 aa18.36■□□□□ 0.53
VSX1-207ENST00000557285 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.36■□□□□ 0.53
VSX1-207ENST00000557285 DDX19AQ9NUU7 478 aaKnown RBP18.36■□□□□ 0.53
VSX1-207ENST00000557285 B4GALT5O43286 388 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 IL9P15248 144 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 NDUFV1P49821 464 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 BCAR1P56945 870 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 DLX2Q07687 328 aaPredicted RBP18.35■□□□□ 0.53
VSX1-207ENST00000557285 NCBP1Q09161 790 aaKnown RBP18.35■□□□□ 0.53
VSX1-207ENST00000557285 IL17AQ16552 155 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 RILPL1Q5EBL4 403 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 NOMO2Q5JPE7 1267 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 NOTUMQ6P988 496 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 CDR2LQ86X02 465 aaPredicted RBP18.35■□□□□ 0.53
VSX1-207ENST00000557285 MCPH1Q8NEM0 835 aa18.35■□□□□ 0.53
VSX1-207ENST00000557285 MRPS27Q92552 414 aaKnown RBP18.35■□□□□ 0.53
VSX1-207ENST00000557285 TCF25Q9BQ70 676 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms