RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 TLR9Q9NR96 1032 aa25.26■■□□□ 1.63
TMEM260-214ENST00000556975 BMP2KQ9NSY1 1161 aaPredicted RBP25.26■■□□□ 1.63
TMEM260-214ENST00000556975 ST18O60284 1047 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 IL9P15248 144 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 U2AF2P26368 475 aaKnown RBP eCLIP25.25■■□□□ 1.633e-6■■■■□ 23.8
TMEM260-214ENST00000556975 PCBP1Q15365 356 aaKnown RBP eCLIP25.25■■□□□ 1.63
TMEM260-214ENST00000556975 EP400NLQ6ZTU2 488 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 ADGRD2Q7Z7M1 963 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 IFNLR1Q8IU57 520 aaPredicted RBP25.25■■□□□ 1.63
TMEM260-214ENST00000556975 RNF149Q8NC42 400 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 HELQQ8TDG4 1101 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 MRPS27Q92552 414 aaKnown RBP25.25■■□□□ 1.63
TMEM260-214ENST00000556975 ZNF558Q96NG5 402 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 IGFLR1Q9H665 355 aa25.25■■□□□ 1.63
TMEM260-214ENST00000556975 CSPG5O95196 566 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 OR52Z1P0C646 297 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 HOXA11P31270 313 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-214ENST00000556975 PPM1AP35813 382 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 ARL2P36404 184 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 PTENP60484 403 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 DLX2Q07687 328 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-214ENST00000556975 TTC38Q5R3I4 469 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 CATSPER3Q86XQ3 398 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 EFHBQ8N7U6 833 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 PIGOQ8TEQ8 1089 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 POLR3CQ9BUI4 534 aaPredicted RBP25.24■■□□□ 1.63
TMEM260-214ENST00000556975 PUF60Q9UHX1 559 aaKnown RBP25.24■■□□□ 1.63
TMEM260-214ENST00000556975 FAM50BQ9Y247 325 aa25.24■■□□□ 1.63
TMEM260-214ENST00000556975 FSCN2O14926 492 aa25.23■■□□□ 1.63
TMEM260-214ENST00000556975 TECP42680 631 aa25.23■■□□□ 1.63
TMEM260-214ENST00000556975 ERVFC1P60507 584 aa25.23■■□□□ 1.63
TMEM260-214ENST00000556975 GNL2Q13823 731 aaKnown RBP25.23■■□□□ 1.63
TMEM260-214ENST00000556975 MRPL10Q7Z7H8 261 aaKnown RBP25.23■■□□□ 1.63
TMEM260-214ENST00000556975 MICAL1Q8TDZ2 1067 aa25.23■■□□□ 1.63
TMEM260-214ENST00000556975 UPF2Q9HAU5 1272 aaKnown RBP25.23■■□□□ 1.63
TMEM260-214ENST00000556975 SPG21Q9NZD8 308 aa25.23■■□□□ 1.63
TMEM260-214ENST00000556975 NOL7Q9UMY1 257 aaKnown RBP25.23■■□□□ 1.63
TMEM260-214ENST00000556975 LINC01565O15544 149 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 TBX10O75333 385 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 MED24O75448 989 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 RPA1P27694 616 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 KRT17Q04695 432 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 TFDP1Q14186 410 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 C4orf32Q8N8J7 132 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 PGBD4Q96DM1 585 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 DBR1Q9UK59 544 aaKnown RBP25.22■■□□□ 1.63
TMEM260-214ENST00000556975 PCDHB2Q9Y5E7 798 aa25.22■■□□□ 1.63
TMEM260-214ENST00000556975 CARNS1A5YM72 827 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 OFD1O75665 1012 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 NRIP1P48552 1158 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 GLB1LQ6UWU2 654 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 SLC39A11Q8N1S5 342 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 ERMNQ8TAM6 284 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 LPPQ93052 612 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 MSLNLQ96KJ4 702 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 CCDC43Q96MW1 224 aaKnown RBP25.21■■□□□ 1.63
TMEM260-214ENST00000556975 NACC1Q96RE7 527 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 CDCA3Q99618 268 aaPredicted RBP25.21■■□□□ 1.63
TMEM260-214ENST00000556975 C1QTNF1Q9BXJ1 281 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 NFKBIZQ9BYH8 718 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 TLE6Q9H808 572 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 CD320Q9NPF0 282 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 KIF3AQ9Y496 699 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 PCDHGC5Q9Y5F6 944 aa25.21■■□□□ 1.63
TMEM260-214ENST00000556975 A0A087WWV3 80 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 FSD2A1L4K1 749 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 MUTP22033 750 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 AXLP30530 894 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 UBXN11Q5T124 520 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 ASAP3Q8TDY4 903 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 TMX3Q96JJ7 454 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 NGRNQ9NPE2 291 aaKnown RBP25.2■■□□□ 1.62
TMEM260-214ENST00000556975 PRKAG3Q9UGI9 489 aa25.2■■□□□ 1.62
TMEM260-214ENST00000556975 MEIS3P2A8K0S8 358 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 MBTPS2O43462 519 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 ERLIN2O94905 339 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 GLRA2P23416 452 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 PBX3P40426 434 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 ALDH7A1P49419 539 aaKnown RBP25.19■■□□□ 1.62
TMEM260-214ENST00000556975 TOB1P50616 345 aaPredicted RBP25.19■■□□□ 1.62
TMEM260-214ENST00000556975 FXR2P51116 673 aaKnown RBP eCLIP25.19■■□□□ 1.62
TMEM260-214ENST00000556975 BCAR1P56945 870 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 CAPSQ13938 189 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 SMAD2Q15796 467 aaKnown RBP25.19■■□□□ 1.62
TMEM260-214ENST00000556975 NOMO2Q5JPE7 1267 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 AGMOQ6ZNB7 445 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 RBM23Q86U06 439 aaKnown RBP25.19■■□□□ 1.62
TMEM260-214ENST00000556975 GJD3Q8N144 294 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 CNNM3Q8NE01 707 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 CLEC1BQ9P126 229 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 CD207Q9UJ71 328 aa25.19■■□□□ 1.62
TMEM260-214ENST00000556975 EYA4O95677 639 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 GLP2RO95838 553 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 MCM2P49736 904 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 NDUFV1P49821 464 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 SMAD4Q13485 552 aaKnown RBP25.18■■□□□ 1.62
TMEM260-214ENST00000556975 PDIA5Q14554 519 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 DUSP6Q16828 381 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 LONRF3Q496Y0 759 aa25.18■■□□□ 1.62
TMEM260-214ENST00000556975 MCPH1Q8NEM0 835 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms