RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SPATS2Q86XZ4 545 aaKnown RBP5.78□□□□□ -1.48
PRPF39-210ENST00000556718 KIF18BQ86Y91 864 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 NOSTRINQ8IVI9 506 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 RABGGTAQ92696 567 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 GBP4Q96PP9 640 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 MPHOSPH9Q99550 1183 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 CABP5Q9NP86 173 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 APOBEC2Q9Y235 224 aaKnown RBP5.78□□□□□ -1.48
PRPF39-210ENST00000556718 ZKSCAN5Q9Y2L8 839 aa5.78□□□□□ -1.48
PRPF39-210ENST00000556718 CTDP1Q9Y5B0 961 aaPredicted RBP5.78□□□□□ -1.48
PRPF39-210ENST00000556718 A0A1W2PRX2 142 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 GPR39O43194 453 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 GAS7O60861 476 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 ALDH1L1O75891 902 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 PEX11BO96011 259 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 BMP5P22003 454 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 ITKQ08881 620 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 FAM47CQ5HY64 1035 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 MTFR1LQ9H019 292 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 PUS7LQ9H0K6 701 aaKnown RBP5.77□□□□□ -1.49
PRPF39-210ENST00000556718 MAGEL2Q9UJ55 1249 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 EID1Q9Y6B2 187 aa5.77□□□□□ -1.49
PRPF39-210ENST00000556718 ADCY7P51828 1080 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 IL2P60568 153 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 TMPRSS15P98073 1019 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 OCRLQ01968 901 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 TOB2Q14106 344 aaPredicted RBP5.76□□□□□ -1.49
PRPF39-210ENST00000556718 SEPT7Q16181 437 aaKnown RBP5.76□□□□□ -1.49
PRPF39-210ENST00000556718 LAIR1Q6GTX8 287 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 C11orf74Q86VG3 221 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 HIPK4Q8NE63 616 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 GPR150Q8NGU9 434 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 VOPP1Q96AW1 172 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 MTMR8Q96EF0 704 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 ORAI3Q9BRQ5 295 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 NRDE2Q9H7Z3 1164 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 PHLDB1Q86UU1 1377 aa5.76□□□□□ -1.49
PRPF39-210ENST00000556718 FAM83GA6ND36 823 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 FOXP2O15409 715 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 FAM20BO75063 409 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 KATNA1O75449 491 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 PROZP22891 400 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 IL12RB1P42701 662 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 ADAM8P78325 824 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 TTF1Q15361 905 aaPredicted RBP5.75□□□□□ -1.49
PRPF39-210ENST00000556718 GAREM2Q75VX8 874 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 ANKRD35Q8N283 1001 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 IGSF22Q8N9C0 903 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 RPL10LQ96L21 214 aaKnown RBP5.75□□□□□ -1.49
PRPF39-210ENST00000556718 GPHA2Q96T91 129 aa5.75□□□□□ -1.49
PRPF39-210ENST00000556718 GEMIN8Q9NWZ8 242 aaKnown RBP5.75□□□□□ -1.49
PRPF39-210ENST00000556718 C2orf78A6NCI8 922 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 GOLGA6L22H0YM25 854 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 M0R2C6 588 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 BPIP17213 487 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 FAPQ12884 760 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 CNGB1Q14028 1251 aaPredicted RBP5.74□□□□□ -1.49
PRPF39-210ENST00000556718 MRGPREQ86SM8 312 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 MIEF2Q96C03 454 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 POLR3GLQ9BT43 218 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 KCNH7Q9NS40 1196 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 THRAP3Q9Y2W1 955 aaKnown RBP5.74□□□□□ -1.49
PRPF39-210ENST00000556718 COQ6Q9Y2Z9 468 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 SPEF1Q9Y4P9 236 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 ASB1Q9Y576 335 aa5.74□□□□□ -1.49
PRPF39-210ENST00000556718 ARID4BQ4LE39 1312 aaPredicted RBP5.74□□□□□ -1.49
PRPF39-210ENST00000556718 TMEM191CA6NGB0 347 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 CBX4O00257 560 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 NEMP1O14524 444 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 GLRX3O76003 335 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 F2P00734 622 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 APEX1P27695 318 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 MAN2A2P49641 1150 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 NEK2P51955 445 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 MTMR1Q13613 665 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 TMEM132BQ14DG7 1078 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 PPP2R5AQ15172 486 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 CATSPEREQ5SY80 951 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 MBNL2Q5VZF2 373 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 IQSEC1Q6DN90 963 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 KLHDC10Q6PID8 442 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 VRK3Q8IV63 474 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 CCAR1Q8IX12 1150 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 DLG3Q92796 817 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 ERCC4Q92889 916 aaPredicted RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 SMAD5Q99717 465 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 CELF4Q9BZC1 486 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 RBM8AQ9Y5S9 174 aaKnown RBP5.73□□□□□ -1.49
PRPF39-210ENST00000556718 XDHP47989 1333 aa5.73□□□□□ -1.49
PRPF39-210ENST00000556718 E2F8A0AVK6 867 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ULK1O75385 1050 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ADRA1BP35368 520 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 KPNA1P52294 538 aaPredicted RBP5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ANTXR2P58335 489 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ELAVL1Q15717 326 aaKnown RBP5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ARHGAP44Q17R89 818 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ATP13A4Q4VNC1 1196 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 TMEM177Q53S58 311 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 ZBTB46Q86UZ6 589 aa5.72□□□□□ -1.49
PRPF39-210ENST00000556718 WDR75Q8IWA0 830 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms