RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 TTLL13PA6NNM8 815 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 E9PMD0 336 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 ASAP2O43150 1006 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 B4GALT5O43286 388 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 B4GALT3O60512 393 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 TSPAN1O60635 241 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 CYP11B2P19099 503 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 AFF1P51825 1210 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 MRPS5P82675 430 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 ATP2C1P98194 919 aaPredicted RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 GRIN1Q05586 938 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 MBTD1Q05BQ5 628 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 PDIA5Q14554 519 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 PTPROQ16827 1216 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 RALGAPA2Q2PPJ7 1873 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 RILPL1Q5EBL4 403 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 SPOUT1Q5T280 376 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 DTHD1Q6ZMT9 781 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 AGMOQ6ZNB7 445 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 FAM43BQ6ZT52 329 aaPredicted RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 ADGRD2Q7Z7M1 963 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 CDR2LQ86X02 465 aaPredicted RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 IFNLR1Q8IU57 520 aaPredicted RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 COLGALT1Q8NBJ5 622 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 ERMNQ8TAM6 284 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 SNX29Q8TEQ0 813 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 ATXN2LQ8WWM7 1075 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 P2RX5Q93086 422 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 CPB2Q96IY4 423 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 CCDC43Q96MW1 224 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 NECAB3Q96P71 396 aaPredicted RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 PNMA5Q96PV4 448 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 TRAIPQ9BWF2 469 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 EIF2AQ9BY44 585 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 INO80BQ9C086 356 aaPredicted RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 BHMT2Q9H2M3 363 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 RNF39Q9H2S5 420 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 DDX19AQ9NUU7 478 aaKnown RBP9.01□□□□□ -0.97
VTI1B-206ENST00000556461 DACT1Q9NYF0 836 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 KIAA1024Q9UPX6 916 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 USP20Q9Y2K6 914 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 RWDD3Q9Y3V2 267 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 PCDHB2Q9Y5E7 798 aa9.01□□□□□ -0.97
VTI1B-206ENST00000556461 ATG2AQ2TAZ0 1938 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 VPS37CA5D8V6 355 aaPredicted RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 ARHGEF35A5YM69 484 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 VWA3AA6NCI4 1184 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 INO80B-WBP1J3KQ70 363 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 ZNF623O75123 536 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 OFD1O75665 1012 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 FGF18O76093 207 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 EOMESO95936 686 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 EDN1P05305 212 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 BMP1P13497 986 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 PRPHP41219 470 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 HYAL1Q12794 435 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 MXD4Q14582 209 aaPredicted RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 TIGD5Q53EQ6 642 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 HAUS3Q68CZ6 603 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 FAM173BQ6P4H8 233 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 MRPL10Q7Z7H8 261 aaKnown RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 SMG8Q8ND04 991 aaKnown RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 LRRC15Q8TF66 581 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 POF1BQ8WVV4 589 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 HLA-CQ95604 372 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 PLIN2Q99541 437 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 KIFC3Q9BVG8 833 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 LMAN2LQ9H0V9 348 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 NSUN3Q9H649 340 aaKnown RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 UBE2ZQ9H832 354 aaPredicted RBP9□□□□□ -0.97
VTI1B-206ENST00000556461 C5orf42Q9H799 3197 aa9□□□□□ -0.97
VTI1B-206ENST00000556461 LRRIQ4A6NIV6 560 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 NT5C1B-RDH14C9J2C7 533 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 K7ELQ4 463 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 LAD1O00515 517 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 LINC01565O15544 149 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 HOXA2O43364 376 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 ARF4P18085 180 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 LAG3P18627 525 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 SYT1P21579 422 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 MUTP22033 750 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 KCNA5P22460 613 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 LTBRP36941 435 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 ERVFC1P60507 584 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 POU5F1BQ06416 359 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 DLX2Q07687 328 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 RESTQ13127 1097 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 TFDP1Q14186 410 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 COL19A1Q14993 1142 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 ZRSR1Q15695 479 aaKnown RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 NAALADL2Q58DX5 795 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 KRT79Q5XKE5 535 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 CDCA2Q69YH5 1023 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 KCNT2Q6UVM3 1135 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 TMEM173Q86WV6 379 aaPredicted RBP8.99□□□□□ -0.97
VTI1B-206ENST00000556461 THNSL1Q8IYQ7 743 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 ABI1Q8IZP0 508 aa8.99□□□□□ -0.97
VTI1B-206ENST00000556461 DAW1Q8N136 415 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms