RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 TNFRSF25Q93038 417 aa25.27■■□□□ 1.64
ACTN1-220ENST00000556433 LPPQ93052 612 aa25.27■■□□□ 1.64
ACTN1-220ENST00000556433 DHX33Q9H6R0 707 aaKnown RBP25.27■■□□□ 1.64
ACTN1-220ENST00000556433 ZSWIM4Q9H7M6 989 aa25.27■■□□□ 1.64
ACTN1-220ENST00000556433 IFT122Q9HBG6 1241 aa25.27■■□□□ 1.64
ACTN1-220ENST00000556433 NT5C1B-RDH14C9J2C7 533 aa25.26■■□□□ 1.63
ACTN1-220ENST00000556433 EIF5BO60841 1220 aaKnown RBP25.26■■□□□ 1.63
ACTN1-220ENST00000556433 PLA2G5P39877 138 aa25.26■■□□□ 1.63
ACTN1-220ENST00000556433 BCAR1P56945 870 aa25.26■■□□□ 1.63
ACTN1-220ENST00000556433 CYP4A11Q02928 519 aa25.26■■□□□ 1.63
ACTN1-220ENST00000556433 XKR9Q5GH70 373 aa25.26■■□□□ 1.63
ACTN1-220ENST00000556433 NSUN7Q8NE18 718 aaKnown RBP25.26■■□□□ 1.63
ACTN1-220ENST00000556433 BMP2KQ9NSY1 1161 aaPredicted RBP25.26■■□□□ 1.63
ACTN1-220ENST00000556433 FAM105AQ9NUU6 356 aa25.26■■□□□ 1.63
ACTN1-220ENST00000556433 SRGAP2BP0DMP2 458 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 SPIRE1Q08AE8 756 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 LAMTOR4Q0VGL1 99 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 GLB1LQ6UWU2 654 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 TMEM184AQ6ZMB5 413 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 TPH2Q8IWU9 490 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 MUTYHQ9UIF7 546 aa25.25■■□□□ 1.63
ACTN1-220ENST00000556433 ARIH1Q9Y4X5 557 aaPredicted RBP25.25■■□□□ 1.63
ACTN1-220ENST00000556433 BTBD18B2RXH4 712 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 ZBTB39O15060 712 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 JAK2O60674 1132 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 ZNF623O75123 536 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 SLITRK3O94933 977 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 TECP42680 631 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 RAB27AP51159 221 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 FOSBP53539 338 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 KCNC3Q14003 757 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 LLGL2Q6P1M3 1020 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 SRGAP1Q7Z6B7 1085 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 TCP11Q8WWU5 503 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 RSPH1Q8WYR4 309 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 PGBD4Q96DM1 585 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 PCDHA12Q9UN75 941 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 INPP5FQ9Y2H2 1132 aa25.24■■□□□ 1.63
ACTN1-220ENST00000556433 ASAP2O43150 1006 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 OFD1O75665 1012 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 TRIM29Q14134 588 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 SMC1AQ14683 1233 aaKnown RBP25.23■■□□□ 1.63
ACTN1-220ENST00000556433 EMC2Q15006 297 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 CALCRLQ16602 461 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 HERC4Q5GLZ8 1057 aaPredicted RBP25.23■■□□□ 1.63
ACTN1-220ENST00000556433 NOMO2Q5JPE7 1267 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 ANKRD54Q6NXT1 300 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 DIS3L2Q8IYB7 885 aaKnown RBP25.23■■□□□ 1.63
ACTN1-220ENST00000556433 MRPL43Q8N983 215 aaKnown RBP25.23■■□□□ 1.63
ACTN1-220ENST00000556433 TMEM169Q96HH4 297 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 EIF2AK1Q9BQI3 630 aaKnown RBP25.23■■□□□ 1.63
ACTN1-220ENST00000556433 PHF7Q9BWX1 381 aaPredicted RBP25.23■■□□□ 1.63
ACTN1-220ENST00000556433 MINDY3Q9H8M7 445 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 AGPAT5Q9NUQ2 364 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 PCDHB2Q9Y5E7 798 aa25.23■■□□□ 1.63
ACTN1-220ENST00000556433 MEIS3P2A8K0S8 358 aa25.22■■□□□ 1.63
ACTN1-220ENST00000556433 LOC730098B7Z3J9 87 aa25.22■■□□□ 1.63
ACTN1-220ENST00000556433 GAS2O43903 313 aaKnown RBP25.22■■□□□ 1.63
ACTN1-220ENST00000556433 ZC3H11AO75152 810 aaKnown RBP eCLIP25.22■■□□□ 1.63
ACTN1-220ENST00000556433 BMS1Q14692 1282 aaKnown RBP25.22■■□□□ 1.63
ACTN1-220ENST00000556433 FERMT3Q86UX7 667 aa25.22■■□□□ 1.63
ACTN1-220ENST00000556433 NRDE2Q9H7Z3 1164 aa25.22■■□□□ 1.63
ACTN1-220ENST00000556433 TBC1D13Q9NVG8 400 aa25.22■■□□□ 1.63
ACTN1-220ENST00000556433 C2orf71A6NGG8 1288 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 SEC24BO95487 1268 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 CXCL14O95715 111 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 CA8P35219 290 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 RNASELQ05823 741 aaKnown RBP25.21■■□□□ 1.63
ACTN1-220ENST00000556433 RNF149Q8NC42 400 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 SUSD6Q92537 303 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 RPGRIP1Q96KN7 1286 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 MTRQ99707 1265 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 HSD17B14Q9BPX1 270 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 APOL5Q9BWW9 433 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 S1PR5Q9H228 398 aa25.21■■□□□ 1.63
ACTN1-220ENST00000556433 TTC12Q9H892 705 aaPredicted RBP25.21■■□□□ 1.63
ACTN1-220ENST00000556433 GALTP07902 379 aa25.2■■□□□ 1.62
ACTN1-220ENST00000556433 HOXA11P31270 313 aaPredicted RBP25.2■■□□□ 1.62
ACTN1-220ENST00000556433 TXKP42681 527 aa25.2■■□□□ 1.62
ACTN1-220ENST00000556433 SYCE2Q6PIF2 218 aa25.2■■□□□ 1.62
ACTN1-220ENST00000556433 MRPL10Q7Z7H8 261 aaKnown RBP25.2■■□□□ 1.62
ACTN1-220ENST00000556433 CARNS1A5YM72 827 aa25.19■■□□□ 1.62
ACTN1-220ENST00000556433 NEMFO60524 1076 aa25.19■■□□□ 1.62
ACTN1-220ENST00000556433 CBX2Q14781 532 aaPredicted RBP25.19■■□□□ 1.62
ACTN1-220ENST00000556433 TMEM173Q86WV6 379 aaPredicted RBP25.19■■□□□ 1.62
ACTN1-220ENST00000556433 VPS52Q8N1B4 723 aa25.19■■□□□ 1.62
ACTN1-220ENST00000556433 CASP10Q92851 521 aa25.19■■□□□ 1.62
ACTN1-220ENST00000556433 IGSF21Q96ID5 467 aa25.19■■□□□ 1.62
ACTN1-220ENST00000556433 GBP3Q9H0R5 595 aa25.19■■□□□ 1.62
ACTN1-220ENST00000556433 WNT7AO00755 349 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 CLASP2O75122 1294 aaKnown RBP25.18■■□□□ 1.62
ACTN1-220ENST00000556433 LYPLA2O95372 231 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 HOXB8P17481 243 aaPredicted RBP25.18■■□□□ 1.62
ACTN1-220ENST00000556433 MXD4Q14582 209 aaPredicted RBP25.18■■□□□ 1.62
ACTN1-220ENST00000556433 UBXN11Q5T124 520 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 AGMOQ6ZNB7 445 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 TMEM87AQ8NBN3 555 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 URGCPQ8TCY9 931 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 EDAQ92838 391 aa25.18■■□□□ 1.62
ACTN1-220ENST00000556433 MTMR9Q96QG7 549 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms