RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZFXP17010 805 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 HALP42357 657 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SCNN1BP51168 640 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 ARHGEF6Q15052 776 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TCEAL1Q15170 157 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 FBXO38Q6PIJ6 1188 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 FOXR2Q6PJQ5 311 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 C14orf80Q86SX3 495 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 DAAM2Q86T65 1068 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 FAM83AQ86UY5 434 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TMTC1Q8IUR5 882 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SPDYE1Q8NFV5 336 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TCP11Q8WWU5 503 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 WDR18Q9BV38 432 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 NT5C3AQ9H0P0 336 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 ZNRF3Q9ULT6 936 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SIK3Q9Y2K2 1263 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 KIAA1217Q5T5P2 1943 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 EML1O00423 815 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TADA3O75528 432 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CYP3A4P08684 503 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 PLA2G4BP0C869 781 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 MAN1A1P33908 653 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CAP2P40123 477 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CASP5P51878 434 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 LRRC63Q05C16 580 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 GRIK3Q13003 919 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 IKQ13123 557 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CYP26C1Q6V0L0 522 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SLFN12Q8IYM2 578 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CHPFQ8IZ52 775 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 FAM9CQ8IZT9 166 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 AGBL3Q8NEM8 1001 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CLIP3Q96DZ5 547 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SLX1AQ9BQ83 275 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 BCAS3Q9H6U6 928 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 VCPKMTQ9H867 229 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 KRT82Q9NSB4 513 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 FBXO28Q9NVF7 368 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TMOD2Q9NZR1 351 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 DAAM1Q9Y4D1 1078 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 MAGED1Q9Y5V3 778 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 ABCB11O95342 1321 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SPDYE3A6NKU9 549 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 PHF20L1A8MW92 1017 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 NDUFB5O43674 189 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 URI1O94763 535 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 NDUFA10O95299 355 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TFRCP02786 760 aaKnown RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 H2AFXP16104 143 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 RPA1P27694 616 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 FIGNQ5HY92 759 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 UNC5DQ6UXZ4 953 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 ARHGAP22Q7Z5H3 698 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 OR8K1Q8NGG5 319 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 SCFD1Q8WVM8 642 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 JAKMIP2Q96AA8 810 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CEP295NLQ96MC4 621 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TEPSINQ96N21 525 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 NOC4LQ9BVI4 516 aaKnown RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 BRD8Q9H0E9 1235 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 VPS33BQ9H267 617 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 KCTD10Q9H3F6 313 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TRIM10Q9UDY6 481 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 TFR2Q9UP52 801 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 CARD8Q9Y2G2 431 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 LUC7L2Q9Y383 392 aaKnown RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 DOCK5Q9H7D0 1870 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF536O15090 1300 aa5.51□□□□□ -1.53
TMEM260-210ENST00000556422 POLR2AP24928 1970 aaKnown RBP5.51□□□□□ -1.53
TMEM260-210ENST00000556422 LCTP09848 1927 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 NFKBIEO00221 500 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 AKR1B10O60218 316 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 HOXD13P35453 343 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 CSE1LP55060 971 aaKnown RBP5.5□□□□□ -1.53
TMEM260-210ENST00000556422 HERVK_113P62684 666 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 DGKZQ13574 1117 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 ZYXQ15942 572 aaKnown RBP5.5□□□□□ -1.53
TMEM260-210ENST00000556422 FAM26FQ5R3K3 315 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 SH2D4BQ5SQS7 431 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 PCGF5Q86SE9 256 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 ZC3H3Q8IXZ2 948 aaKnown RBP5.5□□□□□ -1.53
TMEM260-210ENST00000556422 SYCP3Q8IZU3 236 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 SLC7A5P1Q8MH63 180 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 CCDC155Q8N6L0 562 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 SLF1Q9BQI6 1058 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 CARD6Q9BX69 1037 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 FANCFQ9NPI8 374 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 PANK4Q9NVE7 773 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF446Q9NWS9 450 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 PITPNM2Q9BZ72 1349 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 A0A1W2PQJ5 194 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 RCCD1A6NED2 376 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 EIF3CLB5ME19 914 aaKnown RBP5.5□□□□□ -1.53
TMEM260-210ENST00000556422 MEIS1O00470 390 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 ZNF263O14978 683 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 MUSKO15146 869 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 PLA2G6O60733 806 aa5.5□□□□□ -1.53
TMEM260-210ENST00000556422 TMOD1P28289 359 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms