RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ZNF703Q9H7S9 590 aaPredicted RBP7.29□□□□□ -1.24
PRPF39-209ENST00000556353 PARPBPQ9NWS1 579 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 MSRAQ9UJ68 235 aa7.29□□□□□ -1.24
PRPF39-209ENST00000556353 MYPNQ86TC9 1320 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 ST20-MTHFSA0A0A6YYL1 179 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 TGM5O43548 720 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 PCDH8O95206 1070 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 KIR2DL3P43628 341 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 KLF10Q13118 480 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 ELAVL1Q15717 326 aaKnown RBP7.28□□□□□ -1.24
PRPF39-209ENST00000556353 GPR158Q5T848 1215 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 GSPT2Q8IYD1 628 aaKnown RBP7.28□□□□□ -1.24
PRPF39-209ENST00000556353 NCDNQ9UBB6 729 aa7.28□□□□□ -1.24
PRPF39-209ENST00000556353 A0A0A6YYK5 440 aaPredicted RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 ELL2O00472 640 aaPredicted RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 MTSS1O43312 755 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 NARSO43776 548 aaKnown RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 MCM7P33993 719 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 IL2P60568 153 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 PHC1P78364 1004 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 TUBA3CQ13748 450 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 CNGB1Q14028 1251 aaPredicted RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 SEPT7Q16181 437 aaKnown RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 FKBP15Q5T1M5 1219 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 IGFL4Q6B9Z1 124 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 MFSD5Q6N075 450 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 TUBA3EQ6PEY2 450 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 KIAA0907Q7Z7F0 614 aaPredicted RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 CMTM4Q8IZR5 234 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 ARL8AQ96BM9 186 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 ZNF496Q96IT1 587 aaPredicted RBP7.27□□□□□ -1.25
PRPF39-209ENST00000556353 SOX7Q9BT81 388 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 PCDHB6Q9Y5E3 794 aa7.27□□□□□ -1.25
PRPF39-209ENST00000556353 LSP1P33241 339 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 LSSP48449 732 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 NPEPPSP55786 919 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 Q6ZRM9 215 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 C11orf74Q86VG3 221 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 CDYL2Q8N8U2 506 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 ZNF610Q8N9Z0 462 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 SPTLC3Q9NUV7 552 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 CEP72Q9P209 647 aa7.26□□□□□ -1.25
PRPF39-209ENST00000556353 ING1Q9UK53 422 aaPredicted RBP7.26□□□□□ -1.25
PRPF39-209ENST00000556353 GAAP10253 952 aa7.25□□□□□ -1.25
PRPF39-209ENST00000556353 MAN2A2P49641 1150 aa7.25□□□□□ -1.25
PRPF39-209ENST00000556353 SCNN1GP51170 649 aa7.25□□□□□ -1.25
PRPF39-209ENST00000556353 FHL2Q14192 279 aa7.25□□□□□ -1.25
PRPF39-209ENST00000556353 ZNF662Q6ZS27 426 aa7.25□□□□□ -1.25
PRPF39-209ENST00000556353 DCAF1Q9Y4B6 1507 aa7.25□□□□□ -1.25
PRPF39-209ENST00000556353 MFAP3LO75121 409 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 FKBP9O95302 570 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 ADCYAP1R1P41586 468 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 SPIDRQ14159 915 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 TERF2Q15554 542 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 ZBTB41Q5SVQ8 909 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 FKBP9P1Q75LS8 142 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 UNC5BQ8IZJ1 945 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 PPP1R14CQ8TAE6 165 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 ZNF512Q96ME7 567 aaPredicted RBP7.24□□□□□ -1.25
PRPF39-209ENST00000556353 GPR87Q9BY21 358 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 USP18Q9UMW8 372 aa7.24□□□□□ -1.25
PRPF39-209ENST00000556353 GSG1L2A8MUP6 293 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 NRP1O14786 923 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 NRP2O60462 931 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 ALDH1A2O94788 518 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 IPO13O94829 963 aaKnown RBP7.23□□□□□ -1.25
PRPF39-209ENST00000556353 PFKMP08237 780 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 XPAP23025 273 aaPredicted RBP7.23□□□□□ -1.25
PRPF39-209ENST00000556353 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
PRPF39-209ENST00000556353 ZNF483Q8TF39 744 aaPredicted RBP7.23□□□□□ -1.25
PRPF39-209ENST00000556353 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.23□□□□□ -1.25
PRPF39-209ENST00000556353 ING3Q9NXR8 418 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 REXO2Q9Y3B8 237 aaKnown RBP7.23□□□□□ -1.25
PRPF39-209ENST00000556353 SCRIBQ14160 1630 aa7.23□□□□□ -1.25
PRPF39-209ENST00000556353 ENPP3O14638 875 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 RAB11FIP3O75154 756 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 MYCLP1P12525 358 aaPredicted RBP7.22□□□□□ -1.25
PRPF39-209ENST00000556353 GPR15P49685 360 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 CD69Q07108 199 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 TAF7LQ5H9L4 462 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 FRMD7Q6ZUT3 714 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 NOP9Q86U38 636 aaKnown RBP7.22□□□□□ -1.25
PRPF39-209ENST00000556353 CXorf67Q86X51 503 aaPredicted RBP7.22□□□□□ -1.25
PRPF39-209ENST00000556353 MB21D1Q8N884 522 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 PIK3C3Q8NEB9 887 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 LEO1Q8WVC0 666 aaPredicted RBP7.22□□□□□ -1.25
PRPF39-209ENST00000556353 GAB3Q8WWW8 586 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 MS4A5Q9H3V2 200 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 MMRN2Q9H8L6 949 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 KCNG1Q9UIX4 513 aa7.22□□□□□ -1.25
PRPF39-209ENST00000556353 LCHNA4D1U4 455 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 GOLGA6L6A8MZA4 724 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 SUV39H1O43463 412 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 PDE8AO60658 829 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 LY86O95711 162 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 PEX11BO96011 259 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 ADH4P08319 380 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 GNAT2P19087 354 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 MAKP20794 623 aa7.21□□□□□ -1.26
PRPF39-209ENST00000556353 RABGGTBP53611 331 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms