RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 NASPP49321 788 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-240ENST00000556339 MROH9Q5TGP6 573 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 CCDC30Q5VVM6 783 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 MBLAC2Q68D91 279 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 CYP4F22Q6NT55 531 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 LIMS2Q7Z4I7 341 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 FAM126BQ8IXS8 530 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 FAM9BQ8IZU0 186 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 SLC16A11Q8NCK7 471 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 SH3RF3Q8TEJ3 882 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-240ENST00000556339 COPS5Q92905 334 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 DCPSQ96C86 337 aaKnown RBP4.93□□□□□ -1.62
ATXN3-240ENST00000556339 CHAMP1Q96JM3 812 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 CAPNS2Q96L46 248 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 STK31Q9BXU1 1019 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 RTFDC1Q9BY42 306 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-240ENST00000556339 GLIS2Q9BZE0 524 aaPredicted RBP4.93□□□□□ -1.62
ATXN3-240ENST00000556339 DBNDD1Q9H9R9 158 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 GPRC5DQ9NZD1 345 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 EMC9Q9Y3B6 208 aa4.93□□□□□ -1.62
ATXN3-240ENST00000556339 IBTKQ9P2D0 1353 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-240ENST00000556339 TAF1P21675 1872 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 ARFGEF2Q9Y6D5 1785 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 NPEPPSL1A6NEC2 478 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 RASSF10A6NK89 507 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CCDC85CA6NKD9 419 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 C1QTNF3-AMACRE9PGA6 284 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 PSMD14O00487 310 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 UFL1O94874 794 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 HOXB7P09629 217 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 SLC6A11P48066 632 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 GTF2A2P52657 109 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 GPSM2P81274 684 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 NEXNQ0ZGT2 675 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 SF3B3Q15393 1217 aaKnown RBP4.92□□□□□ -1.62
ATXN3-240ENST00000556339 INF2Q27J81 1249 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CCDC152Q4G0S7 254 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 TMCO4Q5TGY1 634 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 GTF2IRD2BQ6EKJ0 949 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 IQCEQ6IPM2 695 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CEP68Q76N32 757 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 LRP10Q7Z4F1 713 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 GTF2IRD2Q86UP8 949 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 ANKRD18AQ8IVF6 992 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 C2orf69Q8N8R5 385 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 ZBTB38Q8NAP3 1195 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-240ENST00000556339 DPF3Q92784 378 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 TMEM169Q96HH4 297 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 ZSWIM3Q96MP5 696 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CLIC6Q96NY7 704 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CDK5RAP1Q96SZ6 601 aaKnown RBP4.92□□□□□ -1.62
ATXN3-240ENST00000556339 ISCA1Q9BUE6 129 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 IFT57Q9NWB7 429 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CWC25Q9NXE8 425 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-240ENST00000556339 TIMM13Q9Y5L4 95 aaPredicted RBP4.92□□□□□ -1.62
ATXN3-240ENST00000556339 CASP8AP2Q9UKL3 1982 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 TRPM7Q96QT4 1865 aa4.92□□□□□ -1.62
ATXN3-240ENST00000556339 C9orf118A6NHY6 69 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 SUV39H1O43463 412 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 ECE2O60344 883 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 PDE8AO60658 829 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CYP7B1O75881 506 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 HSPA8P11142 646 aaKnown RBP4.91□□□□□ -1.62
ATXN3-240ENST00000556339 MAP2K2P36507 400 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 HMGA2P52926 109 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 HUNKP57058 714 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CST9Q5W186 159 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 USP51Q70EK9 711 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 KRT26Q7Z3Y9 468 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 C8orf58Q8NAV2 365 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CCDC191Q8NCU4 936 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 TBC1D16Q8TBP0 767 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 DPF2Q92785 391 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 DIO2Q92813 273 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CELF1Q92879 486 aaKnown RBP4.91□□□□□ -1.62
ATXN3-240ENST00000556339 ANAPC16Q96DE5 110 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CDC5LQ99459 802 aaKnown RBP4.91□□□□□ -1.62
ATXN3-240ENST00000556339 TMEM168Q9H0V1 697 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 DEF6Q9H4E7 631 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CYP26B1Q9NR63 512 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 LRP2BPQ9P2M1 347 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 POLLQ9UGP5 575 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 CROTQ9UKG9 612 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 MAP3K2Q9Y2U5 619 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 LAMB4A4D0S4 1761 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 KDM3BQ7LBC6 1761 aa4.91□□□□□ -1.62
ATXN3-240ENST00000556339 SHTN1A0MZ66 631 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 PI4KAP2A4QPH2 592 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 YDJCA8MPS7 323 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 MEFVO15553 781 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-240ENST00000556339 PCCAP05165 728 aaPredicted RBP4.9□□□□□ -1.63
ATXN3-240ENST00000556339 SNRPB2P08579 225 aaKnown RBP4.9□□□□□ -1.63
ATXN3-240ENST00000556339 TACR2P21452 398 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 RPS12P25398 132 aaKnown RBP4.9□□□□□ -1.63
ATXN3-240ENST00000556339 IGHMBP2P38935 993 aaKnown RBP4.9□□□□□ -1.63
ATXN3-240ENST00000556339 BCL6P41182 706 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 ECI1P42126 302 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 KCNJ4P48050 445 aa4.9□□□□□ -1.63
ATXN3-240ENST00000556339 ZNF143P52747 638 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms