RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 HIST1H2AJQ99878 128 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 HAPLN2Q9GZV7 340 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 TMX1Q9H3N1 280 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 PCDH12Q9NPG4 1184 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 SYNPO2Q9UMS6 1093 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 CTDP1Q9Y5B0 961 aaPredicted RBP4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 PCDHB6Q9Y5E3 794 aa4.98□□□□□ -1.61
SUPT16H-206ENST00000556309 CDC14BO60729 498 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 H2AFYO75367 372 aaKnown RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 SLPIP03973 132 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 CCT2P78371 535 aaKnown RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 HGFACQ04756 655 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 CD69Q07108 199 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 PTPROQ16827 1216 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 UGT8Q16880 541 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 SLFN13Q68D06 897 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 TAX1BP1Q86VP1 789 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 CNTD1Q8N815 330 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 CDYL2Q8N8U2 506 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 CFHR4Q92496 578 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 GCDHQ92947 438 aaPredicted RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 FDXACB1Q9BRP7 624 aaPredicted RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 SSBP3Q9BWW4 388 aaPredicted RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 SCAND2PQ9GZW5 306 aaPredicted RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 QRSL1Q9H0R6 528 aaKnown RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 CCDC8Q9H0W5 538 aaPredicted RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 KCTD10Q9H3F6 313 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 PUF60Q9UHX1 559 aaKnown RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 EVLQ9UI08 416 aaPredicted RBP4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 PRSS50Q9UI38 385 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 VWA7Q9Y334 891 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 NUMBLQ9Y6R0 609 aa4.97□□□□□ -1.61
SUPT16H-206ENST00000556309 MAFGO15525 162 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 KATNA1O75449 491 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 CR2P20023 1033 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 GUCY2FP51841 1108 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 BPIFB4P59827 614 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 CDK17Q00537 523 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 MGAT5Q09328 741 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 TCIRG1Q13488 830 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 NFYCQ13952 458 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 SAFB2Q14151 953 aaKnown RBP eCLIP4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 FSCN1Q16658 493 aaKnown RBP4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 CRB2Q5IJ48 1285 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 TOR2AQ5JU69 321 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 CLEC14AQ86T13 490 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 ANKRD53Q8N9V6 530 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 PLA2G15Q8NCC3 412 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 GIMAP8Q8ND71 665 aaPredicted RBP4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 PIK3C3Q8NEB9 887 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 SH3RF3Q8TEJ3 882 aaPredicted RBP4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 LMBR1Q8WVP7 490 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 GFM2Q969S9 779 aaKnown RBP4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 SEC61A2Q9H9S3 476 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 DPP7Q9UHL4 492 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 ST6GALNAC2Q9UJ37 374 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 OAZ3Q9UMX2 235 aa4.96□□□□□ -1.62
SUPT16H-206ENST00000556309 DAPK3O43293 454 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 FOXS1O43638 330 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 GAAP10253 952 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 XPAP23025 273 aaPredicted RBP4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 ADCY7P51828 1080 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 SESN2P58004 480 aaPredicted RBP4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 ERVK-21P61565 698 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 TCTN3Q6NUS6 607 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 CIR1Q86X95 450 aaPredicted RBP4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 SLC41A1Q8IVJ1 513 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 SLC7A6OSQ96CW6 309 aaPredicted RBP4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 TMEM176AQ96HP8 235 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 ACAP3Q96P50 834 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 OR14A2Q96R54 314 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 UIMC1Q96RL1 719 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 GPHA2Q96T91 129 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 PLA2G12BQ9BX93 195 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 PCED1AQ9H1Q7 454 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 WDR26Q9H7D7 661 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 AGO3Q9H9G7 860 aaKnown RBP4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 ING3Q9NXR8 418 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 NCDNQ9UBB6 729 aa4.95□□□□□ -1.62
SUPT16H-206ENST00000556309 TOX4O94842 621 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 LY86O95711 162 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 ENPP1P22413 925 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 CANXP27824 592 aaKnown RBP4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 IARSP41252 1262 aaKnown RBP4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 GPR3P46089 330 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 SRSF2Q01130 221 aaKnown RBP4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 ITKQ08881 620 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 MTMR1Q13613 665 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 ICAM4Q14773 271 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 KRT40Q6A162 431 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 GPR135Q8IZ08 494 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 FUKQ8N0W3 1084 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 SHCBP1Q8NEM2 672 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 OR14C36Q8NHC7 312 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 PPP1R14CQ8TAE6 165 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 MTMR8Q96EF0 704 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 SLC2A13Q96QE2 648 aa4.94□□□□□ -1.62
SUPT16H-206ENST00000556309 VPS11Q9H270 941 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms