RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TMED8Q6PL24 325 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CENPQQ7L2Z9 268 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 FASTKD5Q7L8L6 764 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 TMPRSS7Q7RTY8 843 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 TMC3Q7Z5M5 1100 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 TSPYL5Q86VY4 417 aaPredicted RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 WFDC3Q8IUB2 231 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CREG2Q8IUH2 290 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CCAR1Q8IX12 1150 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 SLC44A5Q8NCS7 719 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 BRI3BPQ8WY22 251 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 PTPN18Q99952 460 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 R3HDMLQ9H3Y0 253 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CARS2Q9HA77 564 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CWC22Q9HCG8 908 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 INCENPQ9NQS7 918 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 HELLSQ9NRZ9 838 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 LMCD1Q9NZU5 365 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 CPA4Q9UI42 421 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 PCDHB10Q9UN67 800 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 OAS3Q9Y6K5 1087 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 DDX60LQ5H9U9 1706 aaKnown RBP5.5□□□□□ -1.53
ATXN3-237ENST00000556274 MYH7BA7E2Y1 1941 aa5.5□□□□□ -1.53
ATXN3-237ENST00000556274 A0A0D9SFI3 127 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 SHISA3A0PJX4 238 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 CCDC85CA6NKD9 419 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 HIP1O00291 1037 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 CXCL11O14625 94 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 RANBP6O60518 1105 aaKnown RBP5.49□□□□□ -1.53
ATXN3-237ENST00000556274 FKTNO75072 461 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 PRDM1O75626 825 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 CYP2C8P10632 490 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 FUT4P22083 530 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 HAND2P61296 217 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 CRHR2Q13324 411 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 FAM47AQ5JRC9 791 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 NOL9Q5SY16 702 aaKnown RBP5.49□□□□□ -1.53
ATXN3-237ENST00000556274 AXDND1Q5T1B0 1012 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-237ENST00000556274 PPFIBP1Q86W92 1011 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 C7orf61Q8IZ16 206 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 ABI1Q8IZP0 508 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 FAM43AQ8N2R8 423 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 ENOX1Q8TC92 643 aaKnown RBP5.49□□□□□ -1.53
ATXN3-237ENST00000556274 SMCR8Q8TEV9 937 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-237ENST00000556274 RUFY2Q8WXA3 655 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 TANGO6Q9C0B7 1094 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF287Q9HBT7 754 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 PRKAG3Q9UGI9 489 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 SWAP70Q9UH65 585 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 DUSP13Q9UII6 198 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 ZBTB21Q9ULJ3 1066 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 AFG3L2Q9Y4W6 797 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
ATXN3-237ENST00000556274 RPAP1Q9BWH6 1393 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-237ENST00000556274 SALL3Q9BXA9 1300 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 PLXNB2O15031 1838 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 PARP14Q460N5 1801 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 CEP350Q5VT06 3117 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 MCM3APO60318 1980 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ATRNL1Q5VV63 1379 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 C19orf81C9J6K1 198 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ZNF213O14771 459 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ESR1P03372 595 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 TSPY3P0CV98 308 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 TSPY8P0CW00 308 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 AKR1B1P15121 316 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 SHMT1P34896 483 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 IRX3P78415 501 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-237ENST00000556274 SLC7A5Q01650 507 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 TFAP4Q01664 338 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 SP3Q02447 781 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 PPARAQ07869 468 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 PABPC4Q13310 644 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ARHGEF6Q15052 776 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 GAB4Q2WGN9 574 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 TREML2Q5T2D2 321 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 VPS53Q5VIR6 699 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 WDR78Q5VTH9 848 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 LARP1BQ659C4 914 aaKnown RBP5.48□□□□□ -1.53
ATXN3-237ENST00000556274 TATDN1Q6P1N9 297 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 SLC23A3Q6PIS1 610 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 CD99L2Q8TCZ2 262 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ACER1Q8TDN7 264 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 PAGR1Q9BTK6 254 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 PRDM7Q9NQW5 492 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 CHST7Q9NS84 486 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 GFOD1Q9NXC2 390 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 SAGE1Q9NXZ1 904 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ACTR10Q9NZ32 417 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 ARPP21Q9UBL0 812 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-237ENST00000556274 CLIP2Q9UDT6 1046 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 R3HCC1Q9Y3T6 440 aaKnown RBP5.48□□□□□ -1.53
ATXN3-237ENST00000556274 CTDP1Q9Y5B0 961 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-237ENST00000556274 THSD7BQ9C0I4 1608 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 CCDC171Q6TFL3 1326 aa5.48□□□□□ -1.53
ATXN3-237ENST00000556274 LOC285556D6RIA3 1793 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 A0A0G2JLL6 359 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-237ENST00000556274 TSPY2A6NKD2 308 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 MEIS1O00470 390 aa5.47□□□□□ -1.53
ATXN3-237ENST00000556274 SIGLEC6O43699 453 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms