RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 TSPY8P0CW00 308 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 POU3F3P20264 500 aaPredicted RBP10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 MCCP23508 829 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 SLC1A4P43007 532 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 STAT2P52630 851 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 FGD1P98174 961 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 RAB30Q15771 203 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 TSHZ3Q63HK5 1081 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 NACAP1Q9BZK3 213 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 AP5M1Q9H0R1 490 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 TRPV6Q9H1D0 765 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 HIPK3Q9H422 1215 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 PRDM12Q9H4Q4 367 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 PIDD1Q9HB75 910 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 PDGFCQ9NRA1 345 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 DISC1Q9NRI5 854 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 RNF146Q9NTX7 359 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 CACNA2D2Q9NY47 1150 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 CYP39A1Q9NYL5 469 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 YBX2Q9Y2T7 364 aaKnown RBP10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 SAMM50Q9Y512 469 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 UMODL1Q5DID0 1318 aa10.57□□□□□ -0.72
GTF2A1-204ENST00000556268 LOC102724159A0A0B4J2E5 919 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 ZEB2O60315 1214 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 B4GALT4O60513 344 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 SLC3A2P08195 630 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 PTGS1P23219 599 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 MRPS5P82675 430 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 PPARAQ07869 468 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 PWP2Q15269 919 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 LRRFIP1Q32MZ4 808 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 DUSP28Q4G0W2 176 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 MUM1L1Q5H9M0 696 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 SEZ6L2Q6UXD5 910 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 TLK2Q86UE8 772 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 PI4K2BQ8TCG2 481 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 GPATCH3Q96I76 525 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 INCENPQ9NQS7 918 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 ANAPC4Q9UJX5 808 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 TTC41PQ6P2S7 1318 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 CHD7Q9P2D1 2997 aa10.56□□□□□ -0.72
GTF2A1-204ENST00000556268 FAM170BA6NMN3 283 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 ICAM1P05362 532 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 ALAS1P13196 640 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 TTLL4Q14679 1199 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 ALX1Q15699 326 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 ZC3H12AQ5D1E8 599 aaKnown RBP10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 PCNX4Q63HM2 1172 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 LLGL2Q6P1M3 1020 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 KCTD1Q719H9 257 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 NOL8Q76FK4 1167 aaKnown RBP10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 OTOP2Q7RTS6 562 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 WNT8AQ9H1J5 351 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 ALDH8A1Q9H2A2 487 aaPredicted RBP10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 MTIF3Q9H2K0 278 aaKnown RBP10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 NKX2-4Q9H2Z4 354 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 VTA1Q9NP79 307 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 C1GALT1Q9NS00 363 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 PCDHA11Q9Y5I1 949 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 AK5Q9Y6K8 562 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 DDX49Q9Y6V7 483 aaKnown RBP10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 MCM3APO60318 1980 aa10.55□□□□□ -0.72
GTF2A1-204ENST00000556268 MYH7P12883 1935 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 NMT2O60551 498 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 SUPT20HL2P0C7V6 817 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 SPINK2P20155 84 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 CCL23P55773 120 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 SNAP25P60880 206 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 PSMC6P62333 389 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 CPSF6Q16630 551 aaKnown RBP eCLIP10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 PPM1EQ8WY54 764 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 NAPBQ9H115 298 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 RANBP17Q9H2T7 1088 aaKnown RBP10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 SLC28A3Q9HAS3 691 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 SLC4A7Q9Y6M7 1214 aa10.54□□□□□ -0.72
GTF2A1-204ENST00000556268 ERC2O15083 957 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 ORC4O43929 436 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 PFKMP08237 780 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 RABGGTBP53611 331 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 PURAQ00577 322 aaKnown RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 BAATQ14032 418 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 CCDC85BQ15834 202 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 DIEXFQ68CQ4 756 aaKnown RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 TTBK2Q6IQ55 1244 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 EEPD1Q7L9B9 569 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 FBXO16Q8IX29 292 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 SMYD4Q8IYR2 804 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 OTUD7AQ8TE49 926 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 DCAF4Q8WV16 495 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 CLEC4DQ8WXI8 215 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 WDR11Q9BZH6 1224 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 TCP11L1Q9NUJ3 509 aa10.53□□□□□ -0.72
GTF2A1-204ENST00000556268 PARP2Q9UGN5 583 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms