RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 FAM43BQ6ZT52 329 aaPredicted RBP15.63■□□□□ 0.09
SNX6-206ENST00000556162 FAM228AQ86W67 206 aa15.63■□□□□ 0.09
SNX6-206ENST00000556162 SPIRE2Q8WWL2 714 aa15.63■□□□□ 0.09
SNX6-206ENST00000556162 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.63■□□□□ 0.096e-7■■□□□ 14
SNX6-206ENST00000556162 NTPCRQ9BSD7 190 aaKnown RBP15.63■□□□□ 0.09
SNX6-206ENST00000556162 MINDY3Q9H8M7 445 aa15.63■□□□□ 0.09
SNX6-206ENST00000556162 TANC1Q9C0D5 1861 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 LIG1P18858 919 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 BMP8BP34820 402 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 EFNA5P52803 228 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 PCBP1Q15365 356 aaKnown RBP eCLIP15.62■□□□□ 0.092e-8■■■■■ 73.5
SNX6-206ENST00000556162 CDCA2Q69YH5 1023 aaPredicted RBP15.62■□□□□ 0.09
SNX6-206ENST00000556162 OTOP2Q7RTS6 562 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 CATSPER4Q7RTX7 472 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 CCDC65Q8IXS2 484 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 GRAMD1CQ8IYS0 662 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 FTHL17Q9BXU8 183 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 ERVK-5Q9HDB9 667 aa15.62■□□□□ 0.09
SNX6-206ENST00000556162 SCN5AQ14524 2016 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 TRAK2O60296 914 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 NR1I2O75469 434 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 MYL1P05976 194 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 GAP43P17677 238 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 FGFR4P22455 802 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 ASIC1P78348 528 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 NCBP1Q09161 790 aaKnown RBP15.61■□□□□ 0.09
SNX6-206ENST00000556162 HERC4Q5GLZ8 1057 aaPredicted RBP15.61■□□□□ 0.09
SNX6-206ENST00000556162 CNNM4Q6P4Q7 775 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 TIGD1Q96MW7 591 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 KIFC3Q9BVG8 833 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 BLZF1Q9H2G9 400 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 MTIF3Q9H2K0 278 aaKnown RBP15.61■□□□□ 0.09
SNX6-206ENST00000556162 PANK4Q9NVE7 773 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 RANBP2P49792 3224 aaKnown RBP15.61■□□□□ 0.09
SNX6-206ENST00000556162 ABHD14A-ACY1A0A1B0GW23 586 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 K7ERI5 159 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 SLC16A4O15374 487 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 KINO60870 393 aaKnown RBP15.61■□□□□ 0.09
SNX6-206ENST00000556162 EFCAB14O75071 495 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 BAIAP3O94812 1187 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 ERLIN2O94905 339 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
SNX6-206ENST00000556162 MBTD1Q05BQ5 628 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 CUL4BQ13620 913 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 MAPK6Q16659 721 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 CHRDL2Q6WN34 429 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 FAM178BQ8IXR5 827 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 LMBRD1Q9NUN5 540 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 SEL1LQ9UBV2 794 aa15.61■□□□□ 0.09
SNX6-206ENST00000556162 PHLPP2Q6ZVD8 1323 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 ADGRA3Q8IWK6 1321 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 FRMD3A2A2Y4 597 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 H0YCG3 227 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 RBAK-RBAKDNI3L0D1 243 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
SNX6-206ENST00000556162 CASP1P29466 404 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 PRPF38BQ5VTL8 546 aaKnown RBP15.6■□□□□ 0.09
SNX6-206ENST00000556162 SLC17A8Q8NDX2 589 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 HERVK_113Q902F9 699 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 PRMT7Q9NVM4 692 aaPredicted RBP15.6■□□□□ 0.09
SNX6-206ENST00000556162 ARHGAP28Q9P2N2 729 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 HOOK1Q9UJC3 728 aaKnown RBP15.6■□□□□ 0.09
SNX6-206ENST00000556162 TET1Q8NFU7 2136 aa15.6■□□□□ 0.09
SNX6-206ENST00000556162 ZBBXA8MT70 800 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 SCP2P22307 547 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 SHHQ15465 462 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 TCTN1Q2MV58 587 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 C9orf50Q5SZB4 431 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 SFR1Q86XK3 245 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 TMEM161BQ8NDZ6 487 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 PRIMPOLQ96LW4 560 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 TMX1Q9H3N1 280 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 FZD8Q9H461 694 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 TMEM134Q9H6X4 195 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 CHST12Q9NRB3 414 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 DACT1Q9NYF0 836 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 PVALEFA0A1B0GWK0 134 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 DENND3A2RUS2 1198 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 MAPTP10636 758 aaKnown RBP15.59■□□□□ 0.09
SNX6-206ENST00000556162 NCKAP1LP55160 1127 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 UNC13DQ70J99 1090 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 HAUS6Q7Z4H7 955 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 ADAM2Q99965 735 aa15.59■□□□□ 0.09
SNX6-206ENST00000556162 MRPL44Q9H9J2 332 aaKnown RBP15.59■□□□□ 0.09
SNX6-206ENST00000556162 PIN4Q9Y237 131 aaKnown RBP15.59■□□□□ 0.09
SNX6-206ENST00000556162 SIP14410 1827 aa15.58■□□□□ 0.09
SNX6-206ENST00000556162 K7ENM7 598 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 ACKR2O00590 384 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 ENPP3O14638 875 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 TSPAN1O60635 241 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 PRKCBP05771 671 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 AXLP30530 894 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 ABCD1P33897 745 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 KCNJ6P48051 423 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 STRN3Q13033 797 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 COASYQ13057 564 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 POSTNQ15063 836 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 FAM187BQ17R55 369 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.08
SNX6-206ENST00000556162 RNPC3Q96LT9 517 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms