RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 OCRLQ01968 901 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 ANO4Q32M45 955 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 SNRNP48Q6IEG0 339 aaKnown RBP11.42□□□□□ -0.58
ACTN1-216ENST00000556083 ANKRD13CQ8N6S4 541 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 PCIF1Q9H4Z3 704 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 ZWILCHQ9H900 591 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 C17orf75Q9HAS0 396 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 SMYD2Q9NRG4 433 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 TLR7Q9NYK1 1049 aaKnown RBP11.42□□□□□ -0.58
ACTN1-216ENST00000556083 COX16Q9P0S2 106 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 JCADQ9P266 1359 aa11.42□□□□□ -0.58
ACTN1-216ENST00000556083 COPS2P61201 443 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 CDK17Q00537 523 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 HEATR6Q6AI08 1181 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 TWF2Q6IBS0 349 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 HHIPL2Q6UWX4 724 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 MB21D2Q8IYB1 491 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 RFFLQ8WZ73 363 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 EPAS1Q99814 870 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 MMTAG2Q9BU76 263 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 KDM4CQ9H3R0 1056 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 PARVAQ9NVD7 372 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ANAPC7Q9UJX3 599 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ECE2O60344 883 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 BRD2P25440 801 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 MTA1Q13330 715 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 LRRC41Q15345 812 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 CLEC17AQ6ZS10 378 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 EFL1Q7Z2Z2 1120 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 SCFD1Q8WVM8 642 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ANTXR1Q9H6X2 564 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 USP42Q9H9J4 1324 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 IL18RAPO95256 599 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 CD4P01730 458 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ACADSBP45954 432 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 PIP4K2CQ8TBX8 421 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 RASGRP4Q8TDF6 673 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ADAMTS1Q9UHI8 967 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 SSU72P8A0A1W2PR75 194 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 PXDNLA1KZ92 1463 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 TOM1L1O75674 476 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 CYBBP04839 570 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 LAMC1P11047 1609 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 STAT4Q14765 748 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 IQGAP3Q86VI3 1631 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ZNF677Q86XU0 584 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 ST13P4Q8IZP2 240 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 TSPAN17Q96FV3 270 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 EML4Q9HC35 981 aaKnown RBP11.41□□□□□ -0.58
ACTN1-216ENST00000556083 STOML1Q9UBI4 398 aa11.41□□□□□ -0.58
ACTN1-216ENST00000556083 PRR36Q9H6K5 1346 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 PRKAB2O43741 272 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 ATP2C1P98194 919 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 EDRF1Q3B7T1 1238 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 RABL6Q3YEC7 729 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 NAA35Q5VZE5 725 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 ZBTB33Q86T24 672 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 PRUNE1Q86TP1 453 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 WRNIP1Q96S55 665 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 MMP19Q99542 508 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 F5H6K3 240 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 FGGP02679 453 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 MYL3P08590 195 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 SERPINB9P50453 376 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 KLRC3Q07444 240 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 COASYQ13057 564 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 MORF4L2Q15014 288 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 P3H1Q32P28 736 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 TRAPPC11Q7Z392 1133 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 DDX17Q92841 729 aaKnown RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 ULK4Q96C45 1275 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 MED15Q96RN5 788 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.4□□□□□ -0.582e-9■■■□□ 15.5
ACTN1-216ENST00000556083 TEX13BQ9BXU2 312 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 FRMD8P1Q9BZ68 369 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 STX18Q9P2W9 335 aaKnown RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 ARHGAP26Q9UNA1 814 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 CYP19A1P11511 503 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 KCNH2Q12809 1159 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 MTFR1Q15390 333 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 CEP55Q53EZ4 464 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 SMARCAD1Q9H4L7 1026 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 ABHD10Q9NUJ1 306 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 CHCHD3Q9NX63 227 aaKnown RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 LSM7Q9UK45 103 aaKnown RBP11.4□□□□□ -0.58
ACTN1-216ENST00000556083 L3MBTL1Q9Y468 752 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
ACTN1-216ENST00000556083 FLT1P17948 1338 aa11.4□□□□□ -0.59
ACTN1-216ENST00000556083 CFAP73A6NFT4 308 aa11.39□□□□□ -0.59
ACTN1-216ENST00000556083 BCAR1P56945 870 aa11.39□□□□□ -0.59
ACTN1-216ENST00000556083 WASHC5Q12768 1159 aa11.39□□□□□ -0.59
ACTN1-216ENST00000556083 COG2Q14746 738 aa11.39□□□□□ -0.59
ACTN1-216ENST00000556083 SFR1Q86XK3 245 aa11.39□□□□□ -0.59
ACTN1-216ENST00000556083 GFM2Q969S9 779 aaKnown RBP11.39□□□□□ -0.59
ACTN1-216ENST00000556083 PITPNM3Q9BZ71 974 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms