RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NFX1Q12986 1120 aaKnown RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 STRN3Q13033 797 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 PAK2Q13177 524 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 PSMD2Q13200 908 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 CAPSQ13938 189 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 MAPK6Q16659 721 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 TMEM132AQ24JP5 1023 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 FBXO47Q5MNV8 452 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 CATSPER4Q7RTX7 472 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 APBB1IPQ7Z5R6 666 aaPredicted RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 KSR1Q8IVT5 923 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 DAW1Q8N136 415 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 BADQ92934 168 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 SYAP1Q96A49 352 aaPredicted RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 DNAJC19Q96DA6 116 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 PPP1R16BQ96T49 567 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 FTHL17Q9BXU8 183 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 WNT8AQ9H1J5 351 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 BLZF1Q9H2G9 400 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 MTIF3Q9H2K0 278 aaKnown RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 MRPL44Q9H9J2 332 aaKnown RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 IL23AQ9NPF7 189 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 OLFML3Q9NRN5 406 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 EXOC1Q9NV70 894 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 PRMT7Q9NVM4 692 aaPredicted RBP8.42□□□□□ -1.06
TDP1-214ENST00000556063 RMND1Q9NWS8 449 aa8.42□□□□□ -1.06
TDP1-214ENST00000556063 TET1Q8NFU7 2136 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 TANC1Q9C0D5 1861 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 UMODL1Q5DID0 1318 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 FRMD3A2A2Y4 597 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 K7ENM7 598 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 SLC16A4O15374 487 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 KIF20AO95235 890 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 CXCL10P02778 98 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 RPN1P04843 607 aaKnown RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 CSF2RAP15509 400 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 ZSCAN20P17040 1043 aaPredicted RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 AXLP30530 894 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 COASYQ13057 564 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 CUL4BQ13620 913 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 IKBKEQ14164 716 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 LPIN1Q14693 890 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 SKOR2Q2VWA4 1001 aaPredicted RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 FAM26FQ5R3K3 315 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 CDCA2Q69YH5 1023 aaPredicted RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 TRAF7Q6Q0C0 670 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 HAUS6Q7Z4H7 955 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 DEFB128Q7Z7B8 93 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 SFR1Q86XK3 245 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 BSNDQ8WZ55 320 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 SMARCE1Q969G3 411 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 HVCN1Q96D96 273 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 SCLYQ96I15 445 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 ZNF668Q96K58 619 aaPredicted RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 PRIMPOLQ96LW4 560 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 GSDMAQ96QA5 445 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 IFIH1Q9BYX4 1025 aaKnown RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 NUP62CLQ9H1M0 184 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 ST6GALNAC4Q9H4F1 302 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 TMEM134Q9H6X4 195 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 IFT122Q9HBG6 1241 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 POLD4Q9HCU8 107 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 CHST12Q9NRB3 414 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 EXOC7Q9UPT5 735 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 NOC2LQ9Y3T9 749 aaKnown RBP8.41□□□□□ -1.06
TDP1-214ENST00000556063 PCDHB13Q9Y5F0 798 aa8.41□□□□□ -1.06
TDP1-214ENST00000556063 ABHD14A-ACY1A0A1B0GW23 586 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 DENND3A2RUS2 1198 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ACKR2O00590 384 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 NBNO60934 754 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 GABBR2O75899 941 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 GCNT3O95395 438 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 FGBP02675 491 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 PRKCBP05771 671 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 SKIP12755 728 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ITGB8P26012 769 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 CD52P31358 61 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 NCKAP1LP55160 1127 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 MDM2Q00987 491 aaPredicted RBP8.4□□□□□ -1.06
TDP1-214ENST00000556063 DPYDQ12882 1025 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 PRPF4BQ13523 1007 aaKnown RBP8.4□□□□□ -1.06
TDP1-214ENST00000556063 KCNB1Q14721 858 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 FAM187BQ17R55 369 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 PLEKHG4Q58EX7 1191 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 CNKSR3Q6P9H4 555 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ZNF720Q7Z2F6 126 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 FAM228AQ86W67 206 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 GRAMD1CQ8IYS0 662 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 DBF4BQ8NFT6 615 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 TMEM40Q8WWA1 233 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 KCNN1Q92952 543 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 CCDC51Q96ER9 411 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ADPGKQ9BRR6 497 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 MRPL4Q9BYD3 311 aaKnown RBP8.4□□□□□ -1.06
TDP1-214ENST00000556063 FZD8Q9H461 694 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 CLSTN2Q9H4D0 955 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 AGO3Q9H9G7 860 aaKnown RBP8.4□□□□□ -1.06
TDP1-214ENST00000556063 CDHR5Q9HBB8 845 aa8.4□□□□□ -1.06
TDP1-214ENST00000556063 ERVK-5Q9HDB9 667 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms