RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	PPP1R11	O60927	126 aa	Predicted RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	NOL3	O60936	208 aa	Known RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	NOL4	O94818	638 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	PTK2	Q05397	1052 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	ZNF572	Q7Z3I7	529 aa	Predicted RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	MICALL2	Q8IY33	904 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	ODF2L	Q9ULJ1	636 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	CCDC88A	Q3V6T2	1871 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	OPHN1	O60890	802 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	MED24	O75448	989 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	FAM153B	P0C7A2	387 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	GBP1	P32455	592 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	SNX1	Q13596	522 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	KIF22	Q14807	665 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	KNOP1	Q1ED39	458 aa	Known RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	FAM153C	Q494X1	144 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	FAM133B	Q5BKY9	247 aa	Known RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	C10orf76	Q5T2E6	689 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	HIBCH	Q6NVY1	386 aa	Predicted RBP	13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	HHIPL2	Q6UWX4	724 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	DCAF4	Q8WV16	495 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	FAM153A	Q9UHL3	310 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	LAMB1	P07942	1786 aa		13.23	□□□□□ -0.29
TMPO-212	ENST00000556029	GAK	O14976	1311 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	USP11	P51784	963 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	ZCWPW2	Q504Y3	356 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	MEI1	Q5TIA1	1274 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	TADA2B	Q86TJ2	420 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	CASKIN2	Q8WXE0	1202 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	MAGOHB	Q96A72	148 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	NUF2	Q9BZD4	464 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	HOMER3	Q9NSC5	361 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	RGL1	Q9NZL6	768 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	ZNF70	Q9UC06	446 aa	Predicted RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	RAD51C	O43502	376 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	CTNND1	O60716	968 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	EDRF1	Q3B7T1	1238 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	MCF2L2	Q86YR7	1114 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	CCDC13	Q8IYE1	715 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	SCYL3	Q8IZE3	742 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	METTL13	Q8N6R0	699 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	PBK	Q96KB5	322 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	EFCC1	Q9HA90	598 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	LARS	Q9P2J5	1176 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	PLAA	Q9Y263	795 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	THAP12	O43422	761 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	SH3BP5	O60239	455 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	UCHL3	P15374	230 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	NR1D1	P20393	614 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	TTMP	Q5BVD1	217 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	SLC30A10	Q6XR72	485 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	DNAAF5	Q86Y56	855 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	CCDC89	Q8N998	374 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	USP38	Q8NB14	1042 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	METTL14	Q9HCE5	456 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	INTS9	Q9NV88	658 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	GCNT4	Q9P109	453 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	CNOT7	Q9UIV1	285 aa	Known RBP	13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	AFG3L2	Q9Y4W6	797 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	KIAA1551	Q9HCM1	1747 aa		13.22	□□□□□ -0.29
TMPO-212	ENST00000556029	TTC36	A6NLP5	189 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	RBAK-RBAKDN	I3L0D1	243 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	PGRMC1	O00264	195 aa	Known RBP	13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	IGBP1	P78318	339 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	AZI2	Q9H6S1	392 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	ZNF148	Q9UQR1	794 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	BCR	P11274	1271 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	COG7	P83436	770 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	LIN9	Q5TKA1	542 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	FRMD5	Q7Z6J6	570 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	PALM2	Q8IXS6	379 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	GDF3	Q9NR23	364 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	AIPL1	Q9NZN9	384 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	SUGT1	Q9Y2Z0	365 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	LRRIQ4	A6NIV6	560 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	GFPT2	O94808	682 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	SNHG28	P0DPA3	235 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	CATSPER3	Q86XQ3	398 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	REEP2	Q9BRK0	252 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	RAB17	Q9H0T7	212 aa		13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.21	□□□□□ -0.29
TMPO-212	ENST00000556029	WDR91	A4D1P6	747 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	NR3C1	P04150	777 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	MYB	P10242	640 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	HMGCS2	P54868	508 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	GUCY1A3	Q02108	690 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	RCN2	Q14257	317 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	TRIP13	Q15645	432 aa	Predicted RBP	13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	FOXR2	Q6PJQ5	311 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	SYCE1	Q8N0S2	351 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	RMDN3	Q96TC7	470 aa		13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.21	□□□□□ -0.3
TMPO-212	ENST00000556029	SHOX2	O60902	331 aa	Predicted RBP	13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	TNFRSF8	P28908	595 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	SHMT1	P34896	483 aa		13.2	□□□□□ -0.3
TMPO-212	ENST00000556029	SNX16	P57768	344 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms