RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 DENND4AQ7Z401 1863 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 C2CD4DB7Z1M9 353 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 ZNF623O75123 536 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 MAFO75444 373 aaPredicted RBP19.01■□□□□ 0.63
XRCC3-215ENST00000555964 DRP2Q13474 957 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 RARS2Q5T160 578 aaKnown RBP19.01■□□□□ 0.63
XRCC3-215ENST00000555964 ZDHHC14Q8IZN3 488 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 BLIDQ8IZY5 108 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 DAGLBQ8NCG7 672 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 SLC7A3Q8WY07 619 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 ATOH1Q92858 354 aaPredicted RBP19.01■□□□□ 0.63
XRCC3-215ENST00000555964 NLRP4Q96MN2 994 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 TBC1D13Q9NVG8 400 aa19.01■□□□□ 0.63
XRCC3-215ENST00000555964 DDX25Q9UHL0 483 aaKnown RBP19.01■□□□□ 0.63
XRCC3-215ENST00000555964 SPDYE4A6NLX3 237 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 DDX11L8A8MPP1 907 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 NT5C1B-RDH14C9J2C7 533 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 EPB41L2O43491 1005 aaKnown RBP19■□□□□ 0.63
XRCC3-215ENST00000555964 CSDE1O75534 798 aaKnown RBP19■□□□□ 0.63
XRCC3-215ENST00000555964 TDP2O95551 362 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 NONOQ15233 471 aaKnown RBP eCLIP19■□□□□ 0.631e-6■□□□□ 10
XRCC3-215ENST00000555964 B3GNT9Q6UX72 402 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 KRT25Q7Z3Z0 450 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 CABP7Q86V35 215 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 ETNPPLQ8TBG4 499 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 MBOAT7Q96N66 472 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 EMILIN2Q9BXX0 1053 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 SFXN1Q9H9B4 322 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 NCOA5Q9HCD5 579 aaKnown RBP19■□□□□ 0.63
XRCC3-215ENST00000555964 KANSL3Q9P2N6 904 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 INPP5FQ9Y2H2 1132 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 CNTNAP2Q9UHC6 1331 aa19■□□□□ 0.63
XRCC3-215ENST00000555964 EDIL3O43854 480 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 GALTP07902 379 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 ELMSAN1Q6PJG2 1045 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 RUFY3Q7L099 469 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 SKAP1Q86WV1 359 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 GJA10Q969M2 543 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 ACSF2Q96CM8 615 aaPredicted RBP18.99■□□□□ 0.63
XRCC3-215ENST00000555964 FAM193BQ96PV7 902 aaPredicted RBP18.99■□□□□ 0.63
XRCC3-215ENST00000555964 CEP89Q96ST8 783 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 PHOX2BQ99453 314 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 NRDE2Q9H7Z3 1164 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 AGPAT5Q9NUQ2 364 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 CYP46A1Q9Y6A2 500 aa18.99■□□□□ 0.63
XRCC3-215ENST00000555964 GALR2O43603 387 aaPredicted RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 GAS2O43903 313 aaKnown RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 GFRA3O60609 400 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 STBD1O95210 358 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 XBP1P17861 261 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 QARSP47897 775 aaKnown RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 PPP2R5CQ13362 524 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 SRGAP1Q7Z6B7 1085 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 PSPC1Q8WXF1 523 aaKnown RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 LPPQ93052 612 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 ZNF274Q96GC6 653 aaPredicted RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 FAM20AQ96MK3 541 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 NAP1L4Q99733 375 aaKnown RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 CYP26B1Q9NR63 512 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 PCDHB2Q9Y5E7 798 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 COL4A3BPQ9Y5P4 624 aa18.98■□□□□ 0.63
XRCC3-215ENST00000555964 PTPRZ1P23471 2315 aaPredicted RBP18.98■□□□□ 0.63
XRCC3-215ENST00000555964 CCDC194A0A1B0GVG4 234 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 TMEM150BA6NC51 233 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 M0R2N6 131 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 OFD1O75665 1012 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 CDKL5O76039 1030 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 BRD1O95696 1058 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 GCFC2P16383 781 aaKnown RBP18.97■□□□□ 0.63
XRCC3-215ENST00000555964 RFC5P40937 340 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 PCBP1Q15365 356 aaKnown RBP eCLIP18.97■□□□□ 0.63
XRCC3-215ENST00000555964 CCDC149Q6ZUS6 474 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 ANO5Q75V66 913 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 OTOP3Q7RTS5 596 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 TMEM173Q86WV6 379 aaPredicted RBP18.97■□□□□ 0.63
XRCC3-215ENST00000555964 CNNM3Q8NE01 707 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 TCP11Q8WWU5 503 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 TMEM175Q9BSA9 504 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 GBP3Q9H0R5 595 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 SLKQ9H2G2 1235 aaPredicted RBP18.97■□□□□ 0.63
XRCC3-215ENST00000555964 MFSD1Q9H3U5 465 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 RSAD1Q9HA92 442 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 UBN1Q9NPG3 1134 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 DPP7Q9UHL4 492 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 SSX2IPQ9Y2D8 614 aa18.97■□□□□ 0.63
XRCC3-215ENST00000555964 ARID2Q68CP9 1835 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 C2orf16Q68DN1 1984 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 P4HBP07237 508 aaKnown RBP18.96■□□□□ 0.63
XRCC3-215ENST00000555964 EPCAMP16422 314 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 PTPN14Q15678 1187 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 LETM2Q2VYF4 491 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 SLC22A17Q8WUG5 538 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 CEP170P1Q96L14 293 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 SH2D3AQ9BRG2 576 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 IFT122Q9HBG6 1241 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 ZSWIM6Q9HCJ5 1215 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 CDH22Q9UJ99 828 aa18.96■□□□□ 0.63
XRCC3-215ENST00000555964 TDRD15B5MCY1 1934 aaKnown RBP18.96■□□□□ 0.63
XRCC3-215ENST00000555964 FAM186AA6NE01 2351 aa18.95■□□□□ 0.62
XRCC3-215ENST00000555964 ASAP2O43150 1006 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms