RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 CYP1B1Q16678 543 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 KNOP1Q1ED39 458 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 SLC5A9Q2M3M2 681 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 WASHC2DQ5SRD0 308 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 TRIM68Q6AZZ1 485 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 PPP1R21Q6ZMI0 780 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 ARHGEF18Q6ZSZ5 1173 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 INTS8Q75QN2 995 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 RHOT2Q8IXI1 618 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 PRELID2Q8N945 189 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 MGARPQ8TDB4 240 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 RMDN2Q96LZ7 410 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 SLC4A9Q96Q91 983 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 TGS1Q96RS0 853 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 NAP1L4Q99733 375 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 GCNT4Q9P109 453 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 PFASO15067 1338 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 ANKRD62A6NC57 917 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 TCEA3O75764 348 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 NTSR2O95665 410 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 LMNAP02545 664 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 GNAT1P11488 350 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 CYP11B2P19099 503 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 ALDH3A1P30838 453 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 STX2P32856 288 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 COPB2P35606 906 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 PEX5P50542 639 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 RAD23BP54727 409 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 STRN3Q13033 797 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 TCEAL1Q15170 157 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 SPDYAQ5MJ70 313 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 SPTY2D1Q68D10 685 aaPredicted RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 PPP1R18Q6NYC8 613 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 CCDC137Q6PK04 289 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 ADAT2Q7Z6V5 191 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 ECHDC2Q86YB7 292 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 OLIG1Q8TAK6 271 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 UHMK1Q8TAS1 419 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 ASAP3Q8TDY4 903 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 TEKT4Q8WW24 435 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 ALG3Q92685 438 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 UTP4Q969X6 686 aaKnown RBP8.37□□□□□ -1.07
CHD8-209ENST00000555935 DYNLL2Q96FJ2 89 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 PIGSQ96S52 555 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 SYT11Q9BT88 431 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 VCXQ9H320 206 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 NKIRAS1Q9NYS0 192 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 MTUS1Q9ULD2 1270 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 TRIM33Q9UPN9 1127 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
CHD8-209ENST00000555935 EDIL3O43854 480 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 KRT18P05783 430 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 RASSF2P50749 326 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 CALCOCO2Q13137 446 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 ZNF211Q13398 564 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 RRP1BQ14684 758 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 KCTD19Q17RG1 926 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 DCAF17Q5H9S7 520 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 SEL1L2Q5TEA6 688 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 MTHFD1LQ6UB35 978 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 GLYCTKQ8IVS8 523 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 CNBD1Q8NA66 436 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 MORC4Q8TE76 937 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 FBXO41Q8TF61 875 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 SLC35C1Q96A29 364 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 STK33Q9BYT3 514 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 TMX4Q9H1E5 349 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 RIOX1Q9H6W3 641 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 KCNK9Q9NPC2 374 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 NKX1-2Q9UD57 310 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 AJAP1Q9UKB5 411 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 ACTL7BQ9Y614 415 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 MAST2Q6P0Q8 1798 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 LAMB2P55268 1798 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 MARCH6O60337 910 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 BRAFP15056 766 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 RASA1P20936 1047 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 RXRBP28702 533 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 PRDX5P30044 214 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 POLGP54098 1239 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 YARSP54577 528 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 MGAT5Q09328 741 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 LONRF1Q17RB8 773 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 UBAP2Q5T6F2 1119 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 IRGCQ6NXR0 463 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 EPM2AIP1Q7L775 607 aaPredicted RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 DHX37Q8IY37 1157 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 ANKRD42Q8N9B4 389 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 HAS1Q92839 578 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 FAM210AQ96ND0 272 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 RPS6KC1Q96S38 1066 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 ZSWIM1Q9BR11 485 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 CPVLQ9H3G5 476 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 CDC42EP4Q9H3Q1 356 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 TYW1Q9NV66 732 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 WHRNQ9P202 907 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 CTTNBP2NLQ9P2B4 639 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms