RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CES5AQ6NT32 575 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 CYP4X1Q8N118 509 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 LRRC43Q8N309 656 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 LINC01465Q8N7H1 131 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 FLCNQ8NFG4 579 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 ZNF558Q96NG5 402 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 RTP3Q9BQQ7 232 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 MFSD1Q9H3U5 465 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 OSBPL3Q9H4L5 887 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 ATP6V0A4Q9HBG4 840 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 DZANK1Q9NVP4 752 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 SPG21Q9NZD8 308 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 SLC9A2Q9UBY0 812 aa10.4□□□□□ -0.74
PRKCH-218ENST00000555628 PUF60Q9UHX1 559 aaKnown RBP10.4□□□□□ -0.74
PRKCH-218ENST00000555628 COL1A2P08123 1366 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 WDR81Q562E7 1941 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 DENND3A2RUS2 1198 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 MAFGO15525 162 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 DGAT1O75907 488 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 PAPLNO95428 1278 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 C22orf31O95567 290 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 ATP4AP20648 1035 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 KLRC1P26715 233 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 WNT7BP56706 349 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 HDAC1Q13547 482 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-218ENST00000555628 TDGQ13569 410 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 PKDCCQ504Y2 493 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 CWC27Q6UX04 472 aaKnown RBP10.39□□□□□ -0.75
PRKCH-218ENST00000555628 TMC7Q7Z402 723 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 KIAA2013Q8IYS2 634 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 SIX5Q8N196 739 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 SUMF1Q8NBK3 374 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 SMARCC2Q8TAQ2 1214 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 CYP2W1Q8TAV3 490 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 BCL7CQ8WUZ0 217 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-218ENST00000555628 MAP3K14Q99558 947 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 VN1R3Q9BXE9 311 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 CYP26B1Q9NR63 512 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 KCNH7Q9NS40 1196 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 R4GN57 208 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 PATJQ8NI35 1801 aa10.39□□□□□ -0.75
PRKCH-218ENST00000555628 ATRXP46100 2492 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 J3QL48 77 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 GPR182O15218 404 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
PRKCH-218ENST00000555628 SMARCA1P28370 1054 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 SLC26A2P50443 739 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 STAT5BP51692 787 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 CRYBB1P53674 252 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-218ENST00000555628 UBE2SQ16763 222 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 KIZQ2M2Z5 673 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 ABHD15Q6UXT9 468 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 GPR149Q86SP6 731 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 ECHDC2Q86YB7 292 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 CCDC60Q8IWA6 550 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-218ENST00000555628 PLEKHM2Q8IWE5 1019 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 MAML2Q8IZL2 1156 aaPredicted RBP10.38□□□□□ -0.75
PRKCH-218ENST00000555628 IGDCC4Q8TDY8 1250 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 PIBF1Q8WXW3 757 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 OSMRQ99650 979 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 ADAMTS10Q9H324 1103 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 KCNK12Q9HB15 430 aa10.38□□□□□ -0.75
PRKCH-218ENST00000555628 CEP295Q9C0D2 2601 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 TTC24A2A3L6 582 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 CYP21A2P08686 494 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 IBSPP21815 317 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 KRT17Q04695 432 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 COL9A3Q14050 684 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 WTAPQ15007 396 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 ATAT1Q5SQI0 421 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 SNIP1Q8TAD8 396 aaKnown RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 AUTS2Q8WXX7 1259 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 CUL5Q93034 780 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 MXRA8Q9BRK3 442 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 AZI2Q9H6S1 392 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 AGO4Q9HCK5 861 aaKnown RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 DBR1Q9UK59 544 aaKnown RBP10.37□□□□□ -0.75
PRKCH-218ENST00000555628 GINS2Q9Y248 185 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 COL4A3Q01955 1670 aa10.37□□□□□ -0.75
PRKCH-218ENST00000555628 IFIT3O14879 490 aaKnown RBP10.36□□□□□ -0.75
PRKCH-218ENST00000555628 DHX15O43143 795 aaKnown RBP10.36□□□□□ -0.75
PRKCH-218ENST00000555628 SIAH2O43255 324 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 HBP1O60381 514 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 B4GALT3O60512 393 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 PLEKHA8P1O95397 391 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 VTNP04004 478 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 SP9P0CG40 484 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 CTSAP10619 480 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 GLULP15104 373 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 POLGP54098 1239 aaPredicted RBP10.36□□□□□ -0.75
PRKCH-218ENST00000555628 BCAR1P56945 870 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 PTPN14Q15678 1187 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 ODR4Q5SWX8 454 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 TMC5Q6UXY8 1006 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 MB21D2Q8IYB1 491 aaPredicted RBP10.36□□□□□ -0.75
PRKCH-218ENST00000555628 DCLK2Q8N568 766 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
PRKCH-218ENST00000555628 RUBCNQ92622 972 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms