RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 LOXHD1Q8IVV2 1947 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 HOXA2O43364 376 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 GADD45BO75293 160 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 SPATA31C1P0DKV0 1188 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 FGFR1P11362 822 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 ZSCAN20P17040 1043 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 FGFR4P22455 802 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 CMA1P23946 247 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 RARRES1P49788 294 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 FXR2P51116 673 aaKnown RBP eCLIP10.69□□□□□ -0.72e-8■■■□□ 18.9
ACTN1-215ENST00000555616 MRPS5P82675 430 aaKnown RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 LAMTOR4Q0VGL1 99 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 TPRNQ4KMQ1 711 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 PAN2Q504Q3 1202 aaKnown RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 AXDND1Q5T1B0 1012 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 ECHDC2Q86YB7 292 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 KSR1Q8IVT5 923 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 FSIP1Q8NA03 581 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 TCP11Q8WWU5 503 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 PRPF31Q8WWY3 499 aaKnown RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 P2RX5Q93086 422 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 TMEM143Q96AN5 459 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 ASB2Q96Q27 587 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 POLR3CQ9BUI4 534 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 INO80BQ9C086 356 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 TMEM117Q9H0C3 514 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 CSRNP2Q9H175 543 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 ATP6V0A4Q9HBG4 840 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 IFT122Q9HBG6 1241 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
ACTN1-215ENST00000555616 RNF19AQ9NV58 838 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 FAM13BQ9NYF5 915 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 COG5Q9UP83 839 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 STK24Q9Y6E0 443 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 NLRC5Q86WI3 1866 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 BDP1A6H8Y1 2624 aa10.69□□□□□ -0.7
ACTN1-215ENST00000555616 EVPLQ92817 2033 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 MYO9BQ13459 2157 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 A0A0U1RQF3 1178 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 TBKBP1A7MCY6 615 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 GRM6O15303 877 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 MED24O75448 989 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 CSDE1O75534 798 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 DGAT1O75907 488 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 XRCC6P12956 609 aaKnown RBP eCLIP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 ATF7P17544 494 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 TECP42680 631 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 PDIA5Q14554 519 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 COL19A1Q14993 1142 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 SKIV2LQ15477 1246 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 NAALADL2Q58DX5 795 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 RESP18Q5W5W9 173 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 HAUS3Q68CZ6 603 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 SRGAP1Q7Z6B7 1085 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 ZNF598Q86UK7 904 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 CATSPER3Q86XQ3 398 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 IGSF22Q8N9C0 903 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 ERMNQ8TAM6 284 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 CCDC43Q96MW1 224 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 CLIC6Q96NY7 704 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 MTRQ99707 1265 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 PYM1Q9BRP8 204 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 AGPAT5Q9NUQ2 364 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 DACT1Q9NYF0 836 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 DBR1Q9UK59 544 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 PIN4Q9Y237 131 aaKnown RBP10.68□□□□□ -0.7
ACTN1-215ENST00000555616 MUC3AQ02505 3323 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 KIAA1671Q9BY89 1806 aa10.68□□□□□ -0.7
ACTN1-215ENST00000555616 ASAP2O43150 1006 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 EOMESO95936 686 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 IBSPP21815 317 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-215ENST00000555616 MUTP22033 750 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 RPA1P27694 616 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 UBA7P41226 1012 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 PHKA2P46019 1235 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 RAB27AP51159 221 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 TFF2Q03403 129 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 FAM160A1Q05DH4 1040 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 POU5F1BQ06416 359 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 MXD4Q14582 209 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-215ENST00000555616 PCBP1Q15365 356 aaKnown RBP eCLIP10.67□□□□□ -0.7
ACTN1-215ENST00000555616 IL17AQ16552 155 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 AAK1Q2M2I8 961 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 FAM102BQ5T8I3 360 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 POTEGQ6S5H5 508 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 SHC4Q6S5L8 630 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 CATSPER4Q7RTX7 472 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 IFNLR1Q8IU57 520 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-215ENST00000555616 LRRC43Q8N309 656 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 RASSF8Q8NHQ8 419 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 PIGOQ8TEQ8 1089 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 HLA-CQ95604 372 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 NACC1Q96RE7 527 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 NSUN3Q9H649 340 aaKnown RBP10.67□□□□□ -0.7
ACTN1-215ENST00000555616 LRWD1Q9UFC0 647 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 CCDC39Q9UFE4 941 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 PLAGL2Q9UPG8 496 aa10.67□□□□□ -0.7
ACTN1-215ENST00000555616 A0A1B0GVL5 298 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms