RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, human

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-222	ENST00000555506	DENND2A	Q9ULE3	1009 aa		5.65	□□□□□ -1.5
KTN1-222	ENST00000555506	WASF3	Q9UPY6	502 aa		5.65	□□□□□ -1.5
KTN1-222	ENST00000555506	MYPN	Q86TC9	1320 aa		5.65	□□□□□ -1.51
KTN1-222	ENST00000555506	ECE1	P42892	770 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	KCNC1	P48547	511 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	TRIM25	Q14258	630 aa	Known RBP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	GBX1	Q14549	363 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	IFIT1B	Q5T764	474 aa	Known RBP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	MBNL2	Q5VZF2	373 aa	Known RBP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	SLC41A1	Q8IVJ1	513 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	CARF	Q8N187	725 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	OR14C36	Q8NHC7	312 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	CXorf38	Q8TB03	319 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	TSPEAR	Q8WU66	669 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	SLC12A5	Q9H2X9	1139 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	MTG2	Q9H4K7	406 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	IFT122	Q9HBG6	1241 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	DPP7	Q9UHL4	492 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	PRSS50	Q9UI38	385 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	TUBD1	Q9UJT1	453 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	OFD1	O75665	1012 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	PCDH8	O95206	1070 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	RHBDL3	P58872	404 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	ADAM9	Q13443	819 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	HDAC1	Q13547	482 aa	Predicted RBP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	SPIDR	Q14159	915 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	NOLC1	Q14978	699 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	ANO4	Q32M45	955 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	ARHGAP29	Q52LW3	1261 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	LRSAM1	Q6UWE0	723 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	B3GNT9	Q6UX72	402 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	KSR2	Q6VAB6	950 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	SLC35G2	Q8TBE7	412 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	RUNDC1	Q96C34	613 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	POLR3GL	Q9BT43	218 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	BTBD2	Q9BX70	525 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	OR10A5	Q9H207	317 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	PCDH18	Q9HCL0	1135 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	DLL4	Q9NR61	685 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	NTM	Q9P121	344 aa		5.64	□□□□□ -1.51
KTN1-222	ENST00000555506	MAFG	O15525	162 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	AP1G1	O43747	822 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	OPHN1	O60890	802 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	POU2F2	P09086	479 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	APEX1	P27695	318 aa	Known RBP	5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	SARS	P49591	514 aa	Known RBP	5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	SLC16A1	P53985	500 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	PURA	Q00577	322 aa	Known RBP	5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	KIF23	Q02241	960 aa	Predicted RBP	5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	PPARA	Q07869	468 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	SKIDA1	Q1XH10	827 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	TMC5	Q6UXY8	1006 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	THEMIS	Q8N1K5	641 aa	Predicted RBP	5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	PPM1N	Q8N819	430 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	DTX3	Q8N9I9	347 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	PMM1	Q92871	262 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	TIFA	Q96CG3	184 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	ZSWIM3	Q96MP5	696 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	TAAR9	Q96RI9	348 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	ACE2	Q9BYF1	805 aa	Predicted RBP	5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	ADAM7	Q9H2U9	754 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	SERPINB13	Q9UIV8	391 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	CDY2A	Q9Y6F7	541 aa		5.63	□□□□□ -1.51
KTN1-222	ENST00000555506	CELA3B	P08861	270 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	GPR15	P49685	360 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	CDK17	Q00537	523 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	NFATC3	Q12968	1075 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	ZNF267	Q14586	743 aa	Predicted RBP	5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	GRM3	Q14832	879 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	RTP5	Q14D33	572 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	STIL	Q15468	1287 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	UAP1L1	Q3KQV9	507 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	PRR31	Q5SQ13	230 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	ATAT1	Q5SQI0	421 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	PPP4R4	Q6NUP7	873 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	CATIP	Q7Z7H3	387 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	TTLL6	Q8N841	843 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	CDYL2	Q8N8U2	506 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	WDR48	Q8TAF3	677 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	GAB3	Q8WWW8	586 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	HPS3	Q969F9	1004 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	COA7	Q96BR5	231 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	TMEM209	Q96SK2	561 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	PSMD1	Q99460	953 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	GTPBP4	Q9BZE4	634 aa	Known RBP	5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	C1orf112	Q9NSG2	853 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	KCMF1	Q9P0J7	381 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	ARHGAP20	Q9P2F6	1191 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	FTSJ1	Q9UET6	329 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	SAP30BP	Q9UHR5	308 aa	Known RBP	5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	USP18	Q9UMW8	372 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506	PCDHB6	Q9Y5E3	794 aa		5.62	□□□□□ -1.51
KTN1-222	ENST00000555506		A0A0A6YYJ9	748 aa		5.61	□□□□□ -1.51
KTN1-222	ENST00000555506	CTNND1	O60716	968 aa	Known RBP	5.61	□□□□□ -1.51
KTN1-222	ENST00000555506	MAF	O75444	373 aa	Predicted RBP	5.61	□□□□□ -1.51
KTN1-222	ENST00000555506	TRIM27	P14373	513 aa		5.61	□□□□□ -1.51
KTN1-222	ENST00000555506	RPL13	P26373	211 aa	Known RBP	5.61	□□□□□ -1.51
KTN1-222	ENST00000555506	IL13RA1	P78552	427 aa		5.61	□□□□□ -1.51

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