RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 INPPL1O15357 1258 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 LAMTOR5O43504 91 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 CSDE1O75534 798 aaKnown RBP10.92□□□□□ -0.66
SCFD1-215ENST00000555259 RFPL2O75678 378 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 LAMP2P13473 410 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 TGM1P22735 817 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 HTR4Q13639 388 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 NIPA1Q7RTP0 329 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 MB21D2Q8IYB1 491 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-215ENST00000555259 ZBTB44Q8NCP5 570 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 ATRIPQ8WXE1 791 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 SHDQ96IW2 340 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 SCLT1Q96NL6 688 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 ANO3Q9BYT9 981 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 EPC1Q9H2F5 836 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 CHST12Q9NRB3 414 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 SPATA6Q9NWH7 488 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-215ENST00000555259 NUMBLQ9Y6R0 609 aa10.92□□□□□ -0.66
SCFD1-215ENST00000555259 FAM86B1E9PN63 330 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 IPO5O00410 1097 aaKnown RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 C2CD2LO14523 706 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 OFD1O75665 1012 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 FOSP01100 380 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 FAM86B2P0C5J1 330 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 MYBP10242 640 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 RXRAP19793 462 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF76P36508 570 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 SREBF1P36956 1147 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 CSTF1Q05048 431 aaKnown RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 TWF2Q6IBS0 349 aaKnown RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 ELMSAN1Q6PJG2 1045 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF280BQ86YH2 543 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 CCDC82Q8N4S0 544 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 ST13P5Q8NFI4 369 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 NLRP7Q8WX94 980 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 SMG7Q92540 1137 aaKnown RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF707Q96C28 371 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 CHAMP1Q96JM3 812 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 BCO2Q9BYV7 579 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 DPP7Q9UHL4 492 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 USP18Q9UMW8 372 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 MYH9P35579 1960 aaKnown RBP10.91□□□□□ -0.66
SCFD1-215ENST00000555259 FAM208BQ5VWN6 2430 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 MIA3Q5JRA6 1907 aa10.91□□□□□ -0.66
SCFD1-215ENST00000555259 KANSL1LA0AUZ9 987 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 TEX28O15482 410 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 LILRB5O75023 590 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 PAPLNO95428 1278 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 GLUD1P00367 558 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 ADH1AP07327 375 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 AK2P54819 239 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 GPC5P78333 572 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 PTH1RQ03431 593 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 WWC2Q6AWC2 1192 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 B4GALNT3Q6L9W6 998 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 TYW1BQ6NUM6 668 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 ZNF746Q6NUN9 644 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-215ENST00000555259 GET4Q7L5D6 327 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-215ENST00000555259 PLA2G4DQ86XP0 818 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-215ENST00000555259 FAM167AQ96KS9 214 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 RPS6KC1Q96S38 1066 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
SCFD1-215ENST00000555259 PARD6AQ9NPB6 346 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 RIC8AQ9NPQ8 531 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 FAM105AQ9NUU6 356 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 ZSCAN32Q9NX65 697 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 GABBR1Q9UBS5 961 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
SCFD1-215ENST00000555259 PATJQ8NI35 1801 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 FRYQ5TBA9 3013 aa10.9□□□□□ -0.66
SCFD1-215ENST00000555259 IGLV3-22A0A075B6J6 115 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 ZNF623O75123 536 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 DDHD2O94830 711 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 SOD2P04179 222 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 URODP06132 367 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 PSAPP07602 524 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 SKIP12755 728 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.67
SCFD1-215ENST00000555259 PPM1JQ5JR12 505 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 NFXL1Q6ZNB6 911 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 TMTC3Q6ZXV5 915 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 CHD1LQ86WJ1 897 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 TEX2Q8IWB9 1127 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 NELL1Q92832 810 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 RPP25Q9BUL9 199 aaKnown RBP10.9□□□□□ -0.67
SCFD1-215ENST00000555259 GCOM2Q9BZD3 368 aaPredicted RBP10.9□□□□□ -0.67
SCFD1-215ENST00000555259 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.67
SCFD1-215ENST00000555259 MTF2Q9Y483 593 aaPredicted RBP10.9□□□□□ -0.67
SCFD1-215ENST00000555259 PCDHA10Q9Y5I2 948 aa10.9□□□□□ -0.67
SCFD1-215ENST00000555259 COL4A3Q01955 1670 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 ZNF862O60290 1169 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 OATP04181 439 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 ALDH2P05091 517 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 CALM1P0DP23 149 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 CALM2P0DP24 149 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 CALM3P0DP25 149 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 ADCY7P51828 1080 aa10.89□□□□□ -0.67
SCFD1-215ENST00000555259 NAPAP54920 295 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms