RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
ARHGEF40-206ENST00000555232 AGPAT3Q9NRZ7 376 aa13.2□□□□□ -0.3
ARHGEF40-206ENST00000555232 CEP72Q9P209 647 aa13.2□□□□□ -0.3
ARHGEF40-206ENST00000555232 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 OSBPP22059 807 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 PLTPP55058 493 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 FAN1Q9Y2M0 1017 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 TGFB2P61812 414 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 GMCL1P1Q8NEA9 526 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 IWS1Q96ST2 819 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 KCNK9Q9NPC2 374 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 RCCD1A6NED2 376 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 NEBLO76041 1014 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 FGFR4P22455 802 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 SMARCA1P28370 1054 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 FMO5P49326 533 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 SNRNP35Q16560 246 aaKnown RBP13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 NT5DC1Q5TFE4 455 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 DDX42Q86XP3 938 aaKnown RBP eCLIP13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 RABGGTAQ92696 567 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 KCNG1Q9UIX4 513 aa13.19□□□□□ -0.3
ARHGEF40-206ENST00000555232 FOXN3O00409 490 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 WEE2P0C1S8 567 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 DLG4P78352 724 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 UGCGQ16739 394 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZNF568Q3ZCX4 644 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 ACSF2Q96CM8 615 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 DNAJC19Q96DA6 116 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 LRRC1Q9BTT6 524 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 COL18A1P39060 1754 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 MYO1FO00160 1098 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 CTSHP09668 335 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 SPATA31C1P0DKV0 1188 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 FERP16591 822 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 MCM3P25205 808 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 ARSHQ5FYA8 562 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 CEP85LQ5SZL2 805 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 TREML2Q5T2D2 321 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 PSMD1Q99460 953 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 MRFAP1Q9Y605 127 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 PDXKO00764 312 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 TBC1D8O95759 1140 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 PGM5Q15124 567 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 CEP63Q96MT8 703 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 RBAKQ9NYW8 714 aaPredicted RBP13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 ATP8A1Q9Y2Q0 1164 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 STK24Q9Y6E0 443 aa13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 GOLGA4Q13439 2230 aaKnown RBP13.18□□□□□ -0.3
ARHGEF40-206ENST00000555232 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 PSEN1P49768 467 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 MFAP3P55082 362 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 CC2D1AQ6P1N0 951 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 CDHR1Q96JP9 859 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 OSBPL9Q96SU4 736 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 OSGEPQ9NPF4 335 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 AGO2Q9UKV8 859 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 STRCQ7RTU9 1775 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCL15-CCL14A0A0B4J2E2 113 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 TADA3O75528 432 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 KIAA0754O94854 1291 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 IVLP07476 585 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 MAPK4P31152 587 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 JAK3P52333 1124 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 GALCP54803 685 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCL15Q16663 113 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 GLRA4Q5JXX5 417 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 HOOK3Q86VS8 718 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 UBL4BQ8N7F7 174 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 FAM149B1Q96BN6 582 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 ANAPC7Q9UJX3 599 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 A0A1W2PQC6 194 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZSCAN5CA6NGD5 496 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 PI4K2BG5E9Z4 385 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZRANB2O95218 330 aaKnown RBP eCLIP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 RARRES1P49788 294 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 HUNKP57058 714 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 HERVK_113P62684 666 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 BFSP1Q12934 665 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 TMEM132BQ14DG7 1078 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 MAPK6Q16659 721 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 KRT71Q3SY84 523 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 MKL1Q969V6 931 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 RNF25Q96BH1 459 aaPredicted RBP13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 FBXO40Q9UH90 709 aa13.17□□□□□ -0.3
ARHGEF40-206ENST00000555232 AMACRQ9UHK6 382 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms