RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 CEP89Q96ST8 783 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 TRIM9Q9C026 710 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 TRPV6Q9H1D0 765 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 VPS16Q9H269 839 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 ZSWIM4Q9H7M6 989 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 TRPC6Q9Y210 931 aa19.08■□□□□ 0.65
SHOX-204ENST00000554971 PVALEFA0A1B0GWK0 134 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 SLC26A4O43511 780 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 PQBP1O60828 265 aaKnown RBP19.08■□□□□ 0.64
SHOX-204ENST00000554971 LYPLA2O95372 231 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 PLCG1P19174 1290 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 CCNE1P24864 410 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 RTP1P59025 263 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 FAM193AP78312 1265 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 UBXN1Q04323 297 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 TLE2Q04725 743 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 PPFIA1Q13136 1202 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 HAUS3Q68CZ6 603 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 TTI2Q6NXR4 508 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 FOXR2Q6PJQ5 311 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 CPLX3Q8WVH0 158 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 BBXQ8WY36 941 aaPredicted RBP19.08■□□□□ 0.64
SHOX-204ENST00000554971 TUFT1Q9NNX1 390 aa19.08■□□□□ 0.64
SHOX-204ENST00000554971 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.08■□□□□ 0.64
SHOX-204ENST00000554971 V9GYY5 206 aaPredicted RBP19.08■□□□□ 0.64
SHOX-204ENST00000554971 NRCAMQ92823 1304 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 RBAK-RBAKDNI3L0D1 243 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 FANCGO15287 622 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 CD4P01730 458 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 YWHABP31946 246 aaKnown RBP19.07■□□□□ 0.64
SHOX-204ENST00000554971 GABPB1Q06547 395 aaPredicted RBP19.07■□□□□ 0.64
SHOX-204ENST00000554971 TARBP2Q15633 366 aaKnown RBP19.07■□□□□ 0.64
SHOX-204ENST00000554971 GRIK4Q16099 956 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 XKR3Q5GH77 459 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 PLA2G4FQ68DD2 849 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 KCNK18Q7Z418 384 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 OR8K1Q8NGG5 319 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 ERMNQ8TAM6 284 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 ZNF507Q8TCN5 953 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 PIGOQ8TEQ8 1089 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 RABGGTAQ92696 567 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 PNMA5Q96PV4 448 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 CARD6Q9BX69 1037 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 MRPL44Q9H9J2 332 aaKnown RBP19.07■□□□□ 0.64
SHOX-204ENST00000554971 EXOC1Q9NV70 894 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 TAB2Q9NYJ8 693 aa19.07■□□□□ 0.64
SHOX-204ENST00000554971 TREHO43280 583 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 HBP1O60381 514 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 NPEPPSP55786 919 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 GRB10Q13322 594 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 TSR1Q2NL82 804 aaKnown RBP19.06■□□□□ 0.64
SHOX-204ENST00000554971 HYIQ5T013 277 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 KRT79Q5XKE5 535 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 ZNF662Q6ZS27 426 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 WNT8BQ93098 351 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 ARID3AQ99856 593 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 SEPT9Q9UHD8 586 aaPredicted RBP19.06■□□□□ 0.64
SHOX-204ENST00000554971 ATP11BQ9Y2G3 1177 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 MBLAC1A4D2B0 266 aaPredicted RBP19.06■□□□□ 0.64
SHOX-204ENST00000554971 SPDYE4A6NLX3 237 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 KRT9P35527 623 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 IGBP1P78318 339 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 PTPN11Q06124 597 aaPredicted RBP19.06■□□□□ 0.64
SHOX-204ENST00000554971 FAAP100Q0VG06 881 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 P2RX5Q93086 422 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 FAM167AQ96KS9 214 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 TOX2Q96NM4 488 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 DNAJC7Q99615 494 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 DESI2Q9BSY9 194 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 NIFKQ9BYG3 293 aaKnown RBP19.06■□□□□ 0.64
SHOX-204ENST00000554971 CAPN11Q9UMQ6 739 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 KIAA1024Q9UPX6 916 aa19.06■□□□□ 0.64
SHOX-204ENST00000554971 LUC7L2Q9Y383 392 aaKnown RBP19.06■□□□□ 0.64
SHOX-204ENST00000554971 C17orf102A2RUQ5 167 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 RGS19P49795 217 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 PPP2R3AQ06190 1150 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 MTF1Q14872 753 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 SV2BQ7L1I2 683 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 RSRC2Q7L4I2 434 aaKnown RBP19.05■□□□□ 0.64
SHOX-204ENST00000554971 CEP112Q8N8E3 955 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 PLIN2Q99541 437 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 TET1Q8NFU7 2136 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 SIP14410 1827 aa19.05■□□□□ 0.64
SHOX-204ENST00000554971 FGFR1OPO95684 399 aaKnown RBP19.04■□□□□ 0.64
SHOX-204ENST00000554971 ZSCAN20P17040 1043 aaPredicted RBP19.04■□□□□ 0.64
SHOX-204ENST00000554971 PTGISQ16647 500 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 FIGNQ5HY92 759 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 SEZ6LQ9BYH1 1024 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 MROH7Q68CQ1 1323 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 MUTP22033 750 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 PSMD2Q13200 908 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 MTERF2Q49AM1 385 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 TMEM119Q4V9L6 283 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 TMCO3Q6UWJ1 677 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 CSGALNACT2Q8N6G5 542 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 DHX38Q92620 1227 aaKnown RBP19.04■□□□□ 0.64
SHOX-204ENST00000554971 GOLGA1Q92805 767 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 CYP26B1Q9NR63 512 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 NRBP2Q9NSY0 501 aa19.04■□□□□ 0.64
SHOX-204ENST00000554971 CDC23Q9UJX2 597 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms