RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 ARSHQ5FYA8 562 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 CATSPER4Q7RTX7 472 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 SYT2Q8N9I0 419 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 MCPH1Q8NEM0 835 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 ZNF689Q96CS4 500 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 CDK5RAP3Q96JB5 506 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 ZNF396Q96N95 335 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 C17orf80Q9BSJ5 609 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 PANK2Q9BZ23 570 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 CCSER1Q9C0I3 900 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 MTUS1Q9ULD2 1270 aa13.7□□□□□ -0.22
SYNE2-214ENST00000554928 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 MORC2Q9Y6X9 1032 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-214ENST00000554928 TTC3P53804 2025 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 MYH15Q9Y2K3 1946 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 TMEM265A0A087WTH1 108 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 LRRIQ4A6NIV6 560 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 ASAP2O43150 1006 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 TSPAN1O60635 241 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 DGKIO75912 1065 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 FGFR1P11362 822 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 SFPQP23246 707 aaKnown RBP eCLIP13.69□□□□□ -0.22
SYNE2-214ENST00000554928 PHKA2P46019 1235 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 CDC42EP1Q00587 391 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 MXD4Q14582 209 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-214ENST00000554928 PAN2Q504Q3 1202 aaKnown RBP13.69□□□□□ -0.22
SYNE2-214ENST00000554928 UBXN11Q5T124 520 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 AXDND1Q5T1B0 1012 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-214ENST00000554928 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-214ENST00000554928 ECHDC2Q86YB7 292 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 IFNLR1Q8IU57 520 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-214ENST00000554928 NPAS4Q8IUM7 802 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 ZNF710Q8N1W2 664 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 ARNTL2Q8WYA1 636 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 RAD54LQ92698 747 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 LPPQ93052 612 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 AGPAT5Q9NUQ2 364 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 INSL6Q9Y581 213 aa13.69□□□□□ -0.22
SYNE2-214ENST00000554928 INO80B-WBP1J3KQ70 363 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 YEATS4O95619 227 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 TFDP1Q14186 410 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 ODR4Q5SWX8 454 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
SYNE2-214ENST00000554928 SHC4Q6S5L8 630 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 ZNF598Q86UK7 904 aaKnown RBP13.68□□□□□ -0.22
SYNE2-214ENST00000554928 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 CALML4Q96GE6 196 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 INO80BQ9C086 356 aaPredicted RBP13.68□□□□□ -0.22
SYNE2-214ENST00000554928 NT5C3AQ9H0P0 336 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 C1orf112Q9NSG2 853 aa13.68□□□□□ -0.22
SYNE2-214ENST00000554928 MRPL42Q9Y6G3 142 aaKnown RBP13.68□□□□□ -0.22
SYNE2-214ENST00000554928 PPP6R2O75170 966 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 SLC34A2O95436 690 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 ZSCAN20P17040 1043 aaPredicted RBP13.67□□□□□ -0.22
SYNE2-214ENST00000554928 LIG1P18858 919 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 GUCY2CP25092 1073 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 CLLU1OSQ5K130 101 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
SYNE2-214ENST00000554928 TAS1R3Q7RTX0 852 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 GPBP1Q86WP2 473 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 RASSF8Q8NHQ8 419 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
SYNE2-214ENST00000554928 CCDC113Q9H0I3 377 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 RCOR1Q9UKL0 485 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 LRFN2Q9ULH4 789 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 PCDHA7Q9UN72 937 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 PCDHB7Q9Y5E2 793 aa13.67□□□□□ -0.22
SYNE2-214ENST00000554928 A0A0U1RQF3 1178 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 TBKBP1A7MCY6 615 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 SLC26A4O43511 780 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 LPXNO60711 386 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 PDIA4P13667 645 aaKnown RBP13.66□□□□□ -0.22
SYNE2-214ENST00000554928 ARF4P18085 180 aaPredicted RBP13.66□□□□□ -0.22
SYNE2-214ENST00000554928 NAMPTP43490 491 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 NPTX2P47972 431 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 PEX3P56589 373 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 ERVK-21P61565 698 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 POU5F1BQ06416 359 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
SYNE2-214ENST00000554928 PDILTQ8N807 584 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 GDPD5Q8WTR4 605 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 CASD1Q96PB1 797 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 REEP2Q9BRK0 252 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 FZD8Q9H461 694 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 CHST12Q9NRB3 414 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 FAM105AQ9NUU6 356 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 TMEM161AQ9NX61 479 aa13.66□□□□□ -0.22
SYNE2-214ENST00000554928 EYSQ5T1H1 3165 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 CCDC169A6NNP5 214 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 SLC16A4O15374 487 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 CUTAO60888 179 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms