RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 SGSM3Q96HU1 749 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 CYP39A1Q9NYL5 469 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 VAV3Q9UKW4 847 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 TBC1D8O95759 1140 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 YBX3P16989 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
PCNX1-209ENST00000554879 KIF11P52732 1056 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 USP50Q70EL3 339 aaPredicted RBP17.94■□□□□ 0.46
PCNX1-209ENST00000554879 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 CLEC4DQ8WXI8 215 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 GPRASP2Q96D09 838 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 HAUS4Q9H6D7 363 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 KRT19P08727 400 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 ATP1A2P50993 1020 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 MRPS9P82933 396 aaKnown RBP17.94■□□□□ 0.46
PCNX1-209ENST00000554879 XXYLT1Q8NBI6 393 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 TACO1Q9BSH4 297 aaKnown RBP17.94■□□□□ 0.46
PCNX1-209ENST00000554879 IKZF4Q9H2S9 585 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 AKT3Q9Y243 479 aa17.94■□□□□ 0.46
PCNX1-209ENST00000554879 PLA2G6O60733 806 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 IQCEQ6IPM2 695 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.93■□□□□ 0.46
PCNX1-209ENST00000554879 IQCDQ96DY2 449 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 ABCB6Q9NP58 842 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 CAPN11Q9UMQ6 739 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 IGLV3-22A0A075B6J6 115 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 SLC9A1P19634 815 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 MXI1P50539 228 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 ITGB3BPQ13352 177 aaPredicted RBP17.93■□□□□ 0.46
PCNX1-209ENST00000554879 ARSHQ5FYA8 562 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 RPUSD2Q8IZ73 545 aaKnown RBP17.93■□□□□ 0.46
PCNX1-209ENST00000554879 SASH3O75995 380 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 BRD3Q15059 726 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 FBXO16Q8IX29 292 aaPredicted RBP17.93■□□□□ 0.46
PCNX1-209ENST00000554879 FAM213AQ9BRX8 229 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 TSGA10Q9BZW7 698 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 BCAS3Q9H6U6 928 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 PFASO15067 1338 aa17.93■□□□□ 0.46
PCNX1-209ENST00000554879 ZMYND10O75800 440 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 HSD17B4P51659 736 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 APBA1Q02410 837 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 PPATQ06203 517 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 VSIG10LQ86VR7 867 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 LENG9Q96B70 501 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 HSD17B14Q9BPX1 270 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 UBE2TQ9NPD8 197 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-209ENST00000554879 SCN9AQ15858 1988 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 H3BQF6 201 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 BUB1BO60566 1050 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-209ENST00000554879 SPDL1Q96EA4 605 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 NOX5Q96PH1 765 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 SNCAIPQ9Y6H5 919 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 RARRES1P49788 294 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 LMBRD2Q68DH5 695 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-209ENST00000554879 GBA2Q9HCG7 927 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-209ENST00000554879 ZNF157P51786 506 aaPredicted RBP17.92■□□□□ 0.46
PCNX1-209ENST00000554879 XKR3Q5GH77 459 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 WDR24Q96S15 920 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 SLC5A4Q9NY91 659 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 MAP3K20Q9NYL2 800 aaKnown RBP17.92■□□□□ 0.46
PCNX1-209ENST00000554879 USP20Q9Y2K6 914 aa17.92■□□□□ 0.46
PCNX1-209ENST00000554879 MAFGO15525 162 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 PLS3P13797 630 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 TRPC3Q13507 836 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 GPRC5AQ8NFJ5 357 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 KIFAP3Q92845 792 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 TRIM10Q9UDY6 481 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 ZNF536O15090 1300 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 GFPT1Q06210 699 aaPredicted RBP17.91■□□□□ 0.46
PCNX1-209ENST00000554879 TTLL4Q14679 1199 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 LY6KQ17RY6 165 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 EDRF1Q3B7T1 1238 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 Q3C1V9 767 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 CEP120Q8N960 986 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 RABGGTAQ92696 567 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 AFG3L2Q9Y4W6 797 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 SLC25A27O95847 323 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 ZNF746Q6NUN9 644 aaPredicted RBP17.91■□□□□ 0.46
PCNX1-209ENST00000554879 IRF2BP1Q8IU81 584 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 ARMC2Q8NEN0 867 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 FAM71BQ8TC56 605 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 CTNNBL1Q8WYA6 563 aaPredicted RBP17.91■□□□□ 0.46
PCNX1-209ENST00000554879 ZBED3Q96IU2 234 aaPredicted RBP17.91■□□□□ 0.46
PCNX1-209ENST00000554879 UBIAD1Q9Y5Z9 338 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 MAST2Q6P0Q8 1798 aa17.91■□□□□ 0.46
PCNX1-209ENST00000554879 MYO1FO00160 1098 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 CXCL11O14625 94 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 AKAP3O75969 853 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 PLEKP08567 350 aaPredicted RBP17.9■□□□□ 0.46
PCNX1-209ENST00000554879 XRRA1Q6P2D8 792 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 RHPN2Q8IUC4 686 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 SEPT1Q8WYJ6 367 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 YIPF3Q9GZM5 350 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 MYO1AQ9UBC5 1043 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 GLTPD2A6NH11 291 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 DGAT1O75907 488 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 GJC1P36383 396 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 IFI16Q16666 785 aaKnown RBP17.9■□□□□ 0.46
PCNX1-209ENST00000554879 ARMC3Q5W041 872 aa17.9■□□□□ 0.46
PCNX1-209ENST00000554879 LRRC71Q8N4P6 559 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms