RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 EXOC8Q8IYI6 725 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 LRRC43Q8N309 656 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 TMEM87AQ8NBN3 555 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 FBXO18Q8NFZ0 1043 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 MRPS27Q92552 414 aaKnown RBP13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 C1QTNF1Q9BXJ1 281 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 TMEM60Q9H2L4 133 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
CCDC85C-202ENST00000554877 VCANP13611 3396 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 POTEMA6NI47 508 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 MEIS3P2A8K0S8 358 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 MBTPS2O43462 519 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 MCM2P49736 904 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 HMGN5P82970 282 aaKnown RBP13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 SPIRE1Q08AE8 756 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 CSPP1Q1MSJ5 1256 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 CTC1Q2NKJ3 1217 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 ZNF598Q86UK7 904 aaKnown RBP13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 EFHBQ8N7U6 833 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 TCP11Q8WWU5 503 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 TCF25Q9BQ70 676 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 DHX33Q9H6R0 707 aaKnown RBP13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 IFT122Q9HBG6 1241 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM105AQ9NUU6 356 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 COL4A6Q14031 1691 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
CCDC85C-202ENST00000554877 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 ASAP2O43150 1006 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 USO1O60763 962 aaKnown RBP13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 ERLIN2O94905 339 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 SKIP12755 728 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 LIG1P18858 919 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 BCAR1P56945 870 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 UBE3AQ05086 875 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 GLB1LQ6UWU2 654 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 FERMT3Q86UX7 667 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 CPB2Q96IY4 423 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 FAM193BQ96PV7 902 aaPredicted RBP13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 PCDHB2Q9Y5E7 798 aa13.71□□□□□ -0.21
CCDC85C-202ENST00000554877 ARID2Q68CP9 1835 aa13.71□□□□□ -0.22
CCDC85C-202ENST00000554877 HIDE1A8MVS5 230 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 OFD1O75665 1012 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 CXCL14O95715 111 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 SSBP05455 408 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 PPM1AP35813 382 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 NCBP1Q09161 790 aaKnown RBP13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 TFDP1Q14186 410 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 NBR1Q14596 966 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 NOMO2Q5JPE7 1267 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 TMEM31Q5JXX7 168 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 MCTP1Q6DN14 999 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 ASAP3Q8TDY4 903 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 AUTS2Q8WXX7 1259 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 PGBD4Q96DM1 585 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 TMEM169Q96HH4 297 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 HSD17B14Q9BPX1 270 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 MRPL9Q9BYD2 267 aaKnown RBP13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 POLD4Q9HCU8 107 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 XPNPEP1Q9NQW7 623 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 CLEC1BQ9P126 229 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 PPME1Q9Y570 386 aa13.7□□□□□ -0.22
CCDC85C-202ENST00000554877 GLP2RO95838 553 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 POMCP01189 267 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 U2AF2P26368 475 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 PLCB3Q01970 1234 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 SMAD4Q13485 552 aaKnown RBP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 SMAD2Q15796 467 aaKnown RBP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 DUSP6Q16828 381 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 TMEM132AQ24JP5 1023 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 TTC38Q5R3I4 469 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 CDR2LQ86X02 465 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 ADHFE1Q8IWW8 467 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 VPS52Q8N1B4 723 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 SLC39A11Q8N1S5 342 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 URGCPQ8TCY9 931 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 RPGRIP1Q96KN7 1286 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 POLR3FQ9H1D9 316 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 FOXP1Q9H334 677 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 GPRC5CQ9NQ84 441 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 AGPAT5Q9NUQ2 364 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 TBC1D13Q9NVG8 400 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 DNAJB4Q9UDY4 337 aa13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 FNDC1Q4ZHG4 1894 aaPredicted RBP13.69□□□□□ -0.22
CCDC85C-202ENST00000554877 LRRIQ4A6NIV6 560 aa13.68□□□□□ -0.22
CCDC85C-202ENST00000554877 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
CCDC85C-202ENST00000554877 FSCN2O14926 492 aa13.68□□□□□ -0.22
CCDC85C-202ENST00000554877 GAS2O43903 313 aaKnown RBP13.68□□□□□ -0.22
CCDC85C-202ENST00000554877 MED24O75448 989 aa13.68□□□□□ -0.22
CCDC85C-202ENST00000554877 DGAT1O75907 488 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms