RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 LMBR1Q8WVP7 490 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 EAF2Q96CJ1 260 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-214ENST00000554819 PAWRQ96IZ0 340 aaKnown RBP5.51□□□□□ -1.53
SCFD1-214ENST00000554819 C14orf119Q9NWQ9 140 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 SMPD4Q9NXE4 827 aa5.51□□□□□ -1.53
SCFD1-214ENST00000554819 WASHC2AQ641Q2 1341 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 K7ESF4 209 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 SEC24DO94855 1032 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-214ENST00000554819 LPLP06858 475 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 GAAP10253 952 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 MAGEA10P43363 369 aaPredicted RBP5.5□□□□□ -1.53
SCFD1-214ENST00000554819 LGALS4P56470 323 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 MRPS9P82933 396 aaKnown RBP5.5□□□□□ -1.53
SCFD1-214ENST00000554819 CD69Q07108 199 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCFD1-214ENST00000554819 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 SLC41A1Q8IVJ1 513 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 DNERQ8NFT8 737 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 RPL10LQ96L21 214 aaKnown RBP5.5□□□□□ -1.53
SCFD1-214ENST00000554819 ORAI2Q96SN7 254 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 MENTQ9BUN1 341 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 PLA2G12BQ9BX93 195 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 BRINP2Q9C0B6 783 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 KCTD10Q9H3F6 313 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 DEF6Q9H4E7 631 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 VTA1Q9NP79 307 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 PCDH12Q9NPG4 1184 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.5□□□□□ -1.53
SCFD1-214ENST00000554819 COL4A3BPQ9Y5P4 624 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 CDY2AQ9Y6F7 541 aa5.5□□□□□ -1.53
SCFD1-214ENST00000554819 ALG1L2C9J202 215 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 PRRG2O14669 202 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 MTSS1O43312 755 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 FOXS1O43638 330 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 ZNF623O75123 536 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 RAD17O75943 681 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 TOX4O94842 621 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 LY86O95711 162 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 GUCY2FP51841 1108 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 EFEMP1Q12805 493 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 RIN1Q13671 783 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 TRIM25Q14258 630 aaKnown RBP5.49□□□□□ -1.53
SCFD1-214ENST00000554819 GRM7Q14831 915 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 PTPROQ16827 1216 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 GAREM2Q75VX8 874 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 PRRT2Q7Z6L0 340 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-214ENST00000554819 LYSMD2Q8IV50 215 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 FUKQ8N0W3 1084 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 Q8TCH9 128 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 COG1Q8WTW3 980 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 AUTS2Q8WXX7 1259 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 OR14A2Q96R54 314 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 PLA2G3Q9NZ20 509 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 EVLQ9UI08 416 aaPredicted RBP5.49□□□□□ -1.53
SCFD1-214ENST00000554819 RCAN3Q9UKA8 241 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 SLC30A1Q9Y6M5 507 aa5.49□□□□□ -1.53
SCFD1-214ENST00000554819 A0A1W2PRX2 142 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 COMTP21964 271 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 MEF2AQ02078 507 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-214ENST00000554819 MGAT5Q09328 741 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 TAS1R1Q7RTX1 841 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 POLNQ7Z5Q5 900 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 CMIPQ8IY22 773 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 GPR135Q8IZ08 494 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 CMTM4Q8IZR5 234 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 CNTD1Q8N815 330 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 PRPF38AQ8NAV1 312 aaKnown RBP5.48□□□□□ -1.53
SCFD1-214ENST00000554819 TGFBRAP1Q8WUH2 860 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
SCFD1-214ENST00000554819 GPHA2Q96T91 129 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 FDXACB1Q9BRP7 624 aaPredicted RBP5.48□□□□□ -1.53
SCFD1-214ENST00000554819 ST6GALNAC2Q9UJ37 374 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 EDARQ9UNE0 448 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 TCAF1Q9Y4C2 921 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 NCANO14594 1321 aa5.48□□□□□ -1.53
SCFD1-214ENST00000554819 A0A1W2PR48 441 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 NRP1O14786 923 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 ALDH1A2O94788 518 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 NCLP19338 710 aaKnown RBP5.47□□□□□ -1.53
SCFD1-214ENST00000554819 GPR3P46089 330 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 ERVK-21P61565 698 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 HHEXQ03014 270 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 DUSP8Q13202 625 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 KLF1Q13351 362 aaPredicted RBP5.47□□□□□ -1.53
SCFD1-214ENST00000554819 ICAM4Q14773 271 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 ACAP1Q15027 740 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 FAM180AQ6UWF9 173 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 ADGRE4PQ86SQ3 457 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 AMOTL1Q8IY63 956 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 PIK3C3Q8NEB9 887 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 FATE1Q969F0 183 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 C8orf49Q96NF6 230 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 MPHOSPH9Q99550 1183 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 PRDM12Q9H4Q4 367 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 CD248Q9HCU0 757 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 IL23AQ9NPF7 189 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 DPP7Q9UHL4 492 aa5.47□□□□□ -1.53
SCFD1-214ENST00000554819 LOC105371045A0A1W2PR82 267 aa5.46□□□□□ -1.54
SCFD1-214ENST00000554819 UBE2QL1A1L167 161 aa5.46□□□□□ -1.54
SCFD1-214ENST00000554819 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms