RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 ZSCAN31Q96LW9 406 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 NLRP4Q96MN2 994 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 LRFN3Q9BTN0 628 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 NGRNQ9NPE2 291 aaKnown RBP12.42□□□□□ -0.42
ABCD4-221ENST00000554453 PCDHGC5Q9Y5F6 944 aa12.42□□□□□ -0.42
ABCD4-221ENST00000554453 FSD2A1L4K1 749 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 CARNS1A5YM72 827 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 WNT7AO00755 349 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 PER2O15055 1255 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 OFD1O75665 1012 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 ALADP13716 330 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 HOXA11P31270 313 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-221ENST00000554453 TXKP42681 527 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 ALDH7A1P49419 539 aaKnown RBP12.41□□□□□ -0.42
ABCD4-221ENST00000554453 NDUFV1P49821 464 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 RAB27AP51159 221 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 MXD4Q14582 209 aaPredicted RBP12.41□□□□□ -0.42
ABCD4-221ENST00000554453 SAFBQ15424 915 aaKnown RBP eCLIP12.41□□□□□ -0.42
ABCD4-221ENST00000554453 CLUL1Q15846 466 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 DUSP6Q16828 381 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 TMEM31Q5JXX7 168 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 FERMT3Q86UX7 667 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 SLC39A11Q8N1S5 342 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 MRPL9Q9BYD2 267 aaKnown RBP12.41□□□□□ -0.42
ABCD4-221ENST00000554453 MINDY3Q9H8M7 445 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 XPNPEP1Q9NQW7 623 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 FAM105AQ9NUU6 356 aa12.41□□□□□ -0.42
ABCD4-221ENST00000554453 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 GLP2RO95838 553 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 BCAR1P56945 870 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 PTENP60484 403 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 KCNC3Q14003 757 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 EMC2Q15006 297 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 PCBP1Q15365 356 aaKnown RBP eCLIP12.4□□□□□ -0.42
ABCD4-221ENST00000554453 NOMO2Q5JPE7 1267 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 TMC7Q7Z402 723 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 IFNLR1Q8IU57 520 aaPredicted RBP12.4□□□□□ -0.42
ABCD4-221ENST00000554453 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
ABCD4-221ENST00000554453 RNF149Q8NC42 400 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 SMRP1Q8NCR6 262 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 PGBD4Q96DM1 585 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 C8orf76Q96K31 380 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 KIF2CQ99661 725 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 MTRQ99707 1265 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 TMEM60Q9H2L4 133 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
ABCD4-221ENST00000554453 C11orf16Q9NQ32 467 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 AGPAT5Q9NUQ2 364 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 PIN4Q9Y237 131 aaKnown RBP12.4□□□□□ -0.42
ABCD4-221ENST00000554453 PCDHB2Q9Y5E7 798 aa12.4□□□□□ -0.42
ABCD4-221ENST00000554453 NEMFO60524 1076 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 DGAT1O75907 488 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 GALTP07902 379 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 SPATA31C1P0DKV0 1188 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 AXLP30530 894 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 FOSBP53539 338 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
ABCD4-221ENST00000554453 GLB1LQ6UWU2 654 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 AGMOQ6ZNB7 445 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 CCDC83Q8IWF9 413 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 FBXO18Q8NFZ0 1043 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 LPPQ93052 612 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
ABCD4-221ENST00000554453 TCF25Q9BQ70 676 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 SH2B1Q9NRF2 756 aaPredicted RBP12.39□□□□□ -0.43
ABCD4-221ENST00000554453 KANSL3Q9P2N6 904 aa12.39□□□□□ -0.43
ABCD4-221ENST00000554453 TECTAO75443 2155 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 C2orf71A6NGG8 1288 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 MEIS3P2A8K0S8 358 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 HIDE1A8MVS5 230 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 NT5C1B-RDH14C9J2C7 533 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 DCXO43602 365 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 CXCL14O95715 111 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 ATP2B1P20020 1258 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 MCM7P33993 719 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 ARL2P36404 184 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 PBX3P40426 434 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 RARRES1P49788 294 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 ORC2Q13416 577 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-221ENST00000554453 TFDP1Q14186 410 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 BMS1Q14692 1282 aaKnown RBP12.38□□□□□ -0.43
ABCD4-221ENST00000554453 ZNF174Q15697 407 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 LONRF3Q496Y0 759 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 C8orf34Q49A92 452 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 UBXN11Q5T124 520 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 PLPP4Q5VZY2 271 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 DDX53Q86TM3 631 aaKnown RBP12.38□□□□□ -0.43
ABCD4-221ENST00000554453 CNNM3Q8NE01 707 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 VN1R2Q8NFZ6 395 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 SUSD6Q92537 303 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 TMEM169Q96HH4 297 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 POLR3CQ9BUI4 534 aaPredicted RBP12.38□□□□□ -0.43
ABCD4-221ENST00000554453 S1PR5Q9H228 398 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 TUFT1Q9NNX1 390 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 ENTPD7Q9NQZ7 604 aa12.38□□□□□ -0.43
ABCD4-221ENST00000554453 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms