RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ORAI2Q96SN7 254 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 PTPN18Q99952 460 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 FDXACB1Q9BRP7 624 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 KRTAP9-3Q9BYQ3 159 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 SEC61A2Q9H9S3 476 aa6.86□□□□□ -1.31
SCFD1-211ENST00000554437 CCM2LQ9NUG4 571 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 PUF60Q9UHX1 559 aaKnown RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 EVLQ9UI08 416 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-211ENST00000554437 NPEPPSL1A6NEC2 478 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 SEC24DO94855 1032 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-211ENST00000554437 MT-CO1P00395 513 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 MYBL2P10244 700 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 MTHFD2P13995 350 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 IARSP41252 1262 aaKnown RBP6.85□□□□□ -1.31
SCFD1-211ENST00000554437 CTSWP56202 376 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 MRPS9P82933 396 aaKnown RBP6.85□□□□□ -1.31
SCFD1-211ENST00000554437 ATP2C1P98194 919 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-211ENST00000554437 SRSF2Q01130 221 aaKnown RBP6.85□□□□□ -1.31
SCFD1-211ENST00000554437 CD69Q07108 199 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 TCIRG1Q13488 830 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 BRDTQ58F21 947 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-211ENST00000554437 SLFN13Q68D06 897 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 GLB1L2Q8IW92 636 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 AUTS2Q8WXX7 1259 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 PPP4R1LQ9P1A2 415 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 RAPGEFL1Q9UHV5 662 aa6.85□□□□□ -1.31
SCFD1-211ENST00000554437 LY86O95711 162 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 GAAP10253 952 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 BPIFB4P59827 614 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 CCT2P78371 535 aaKnown RBP6.84□□□□□ -1.31
SCFD1-211ENST00000554437 HGFACQ04756 655 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 ACAP1Q15027 740 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 CLUL1Q15846 466 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 ABCB5Q2M3G0 1257 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 GLB1LQ6UWU2 654 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 CBARPQ8N350 705 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-211ENST00000554437 PPP1R14CQ8TAE6 165 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 SMAD5Q99717 465 aaKnown RBP6.84□□□□□ -1.31
SCFD1-211ENST00000554437 DPYSL5Q9BPU6 564 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 SLC6A15Q9H2J7 730 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 MKS1Q9NXB0 559 aa6.84□□□□□ -1.31
SCFD1-211ENST00000554437 GABRDO14764 452 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 CDC14BO60729 498 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 CFBP00751 764 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 CR2P20023 1033 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 ADCY7P51828 1080 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 MUM1Q2TAK8 710 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 INAVAQ3KP66 663 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 KRT40Q6A162 431 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 KCNK18Q7Z418 384 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 LIMS2Q7Z4I7 341 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 ANKRD53Q8N9V6 530 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 PIK3C3Q8NEB9 887 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 C1orf162Q8NEQ5 155 aaPredicted RBP6.83□□□□□ -1.32
SCFD1-211ENST00000554437 CFHR4Q92496 578 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 RPL10LQ96L21 214 aaKnown RBP6.83□□□□□ -1.32
SCFD1-211ENST00000554437 BDH2Q9BUT1 245 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 ASPSCR1Q9BZE9 553 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 MEGF9Q9H1U4 602 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 C14orf93Q9H972 538 aaKnown RBP6.83□□□□□ -1.32
SCFD1-211ENST00000554437 IFT122Q9HBG6 1241 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 OAZ3Q9UMX2 235 aa6.83□□□□□ -1.32
SCFD1-211ENST00000554437 NCANO14594 1321 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 SHTN1A0MZ66 631 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 MATN2O00339 956 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 PRRG2O14669 202 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 TOX4O94842 621 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 OSMP13725 252 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 KIR2DL3P43628 341 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 ERICH6BQ5W0A0 696 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 TAX1BP1Q86VP1 789 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 UNC5BQ8IZJ1 945 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 GIMAP8Q8ND71 665 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-211ENST00000554437 TSPEARQ8WU66 669 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 FAXDC2Q96IV6 333 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 GNRHR2Q96P88 292 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
SCFD1-211ENST00000554437 DDX56Q9NY93 547 aaKnown RBP6.82□□□□□ -1.32
SCFD1-211ENST00000554437 TRIM75PA6NK02 468 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 SLC26A4O43511 780 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 ALDH1A2O94788 518 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 SLC5A3P53794 718 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 EXOSC10Q01780 885 aaKnown RBP6.81□□□□□ -1.32
SCFD1-211ENST00000554437 CIR1Q86X95 450 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-211ENST00000554437 SHCBP1Q8NEM2 672 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 FUBP3Q96I24 572 aaKnown RBP eCLIP6.81□□□□□ -1.32
SCFD1-211ENST00000554437 ACE2Q9BYF1 805 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-211ENST00000554437 TYW1Q9NV66 732 aaKnown RBP6.81□□□□□ -1.32
SCFD1-211ENST00000554437 NCDNQ9UBB6 729 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 GPR45Q9Y5Y3 372 aa6.81□□□□□ -1.32
SCFD1-211ENST00000554437 A0A1W2PR48 441 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 PRAMEF4O60810 478 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 ITGB3P05106 788 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 JUNP05412 331 aaKnown RBP6.8□□□□□ -1.32
SCFD1-211ENST00000554437 VSIG10L2P0DP72 767 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 MTNR1BP49286 362 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 PLP2Q04941 152 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 ACAP2Q15057 778 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 PTPN21Q16825 1174 aa6.8□□□□□ -1.32
SCFD1-211ENST00000554437 GAGE13Q4V321 117 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms