RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 ZNF131P52739 623 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 COPS2P61201 443 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 GIT2Q14161 759 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 C10orf76Q5T2E6 689 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 KCNV2Q8TDN2 545 aa18.27■□□□□ 0.52
PPP4R3A-202ENST00000554390 GDF11O95390 407 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 PECAM1P16284 738 aaPredicted RBP18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 MSH2P43246 934 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 GALCP54803 685 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 PSMD2Q13200 908 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLC29A2Q14542 456 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 PROM2Q8N271 834 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 CERS5Q8N5B7 392 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 ARHGEF26Q96DR7 871 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 ANO3Q9BYT9 981 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 CCDC113Q9H0I3 377 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 USP40Q9NVE5 1235 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 ADAM22Q9P0K1 906 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 GGA1Q9UJY5 639 aa18.27■□□□□ 0.51
PPP4R3A-202ENST00000554390 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 GOLGA6L10A0A0M3HER8 536 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 FAM86B1E9PN63 330 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 AFPP02771 609 aaKnown RBP18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 FAM86B2P0C5J1 330 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 PDE6CP51160 858 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 CYP2J2P51589 502 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLC12A3P55017 1021 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 BNIP1Q12981 228 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 CCDC38Q502W7 563 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 RAB17Q9H0T7 212 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 ZDHHC18Q9NUE0 388 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 ZFATQ9P243 1243 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 STXBP5LQ9Y2K9 1186 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 SNX24Q9Y343 169 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 USP15Q9Y4E8 981 aaPredicted RBP18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 ESYT2A0FGR8 921 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 TISP43B9A030 160 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 ZBTB5O15062 677 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 TTLL1O95922 423 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 PLTPP55058 493 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 TAF11Q15544 211 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 LNX1Q8TBB1 728 aaPredicted RBP18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 OSBPL1AQ9BXW6 950 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 ARHGEF3Q9NR81 526 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 PKD2L1Q9P0L9 805 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 PNMA3Q9UL41 463 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 TRIM33Q9UPN9 1127 aa18.26■□□□□ 0.51
PPP4R3A-202ENST00000554390 LUC7L3O95232 432 aaKnown RBP18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 MARCKSL1P49006 195 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 SNX1Q13596 522 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 PRR5LQ6MZQ0 368 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 SUCLA2Q9P2R7 463 aaPredicted RBP18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 SERPINB13Q9UIV8 391 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 SPATA31A5Q5VU36 1347 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 SPATA31A7Q8IWB4 1347 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 EML1O00423 815 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 ATMINO43313 823 aaPredicted RBP18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 ASPRV1Q53RT3 343 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 DCAF12L1Q5VU92 463 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 NAF1Q96HR8 494 aaKnown RBP18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 MLXIPLQ9NP71 852 aa18.25■□□□□ 0.51
PPP4R3A-202ENST00000554390 OAS1P00973 400 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 AGTP01019 485 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 NR3C1P04150 777 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 KRT13P13646 458 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 SHMT1P34896 483 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 CLK2P49760 499 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 ATP11AP98196 1134 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 SEPT2Q15019 361 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 CNGA2Q16280 664 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 KNOP1Q1ED39 458 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 DUPD1Q68J44 220 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLFN11Q7Z7L1 901 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 NT5DC3Q86UY8 548 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 FGFR1OP2Q9NVK5 253 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 DNAJC17Q9NVM6 304 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 H2AFZP0C0S5 128 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 SPATA31C1P0DKV0 1188 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 ATP4AP20648 1035 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 LACTBP83111 547 aaPredicted RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 DR1Q01658 176 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 KLRC3Q07444 240 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 LRRC14Q15048 493 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 C6orf118Q5T5N4 469 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 H2AFVQ71UI9 128 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLC35G2Q8TBE7 412 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 EPS8L3Q8TE67 593 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 SLC35C1Q96A29 364 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 CEP63Q96MT8 703 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 ERP44Q9BS26 406 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 CPSF2Q9P2I0 782 aaKnown RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 DAAM1Q9Y4D1 1078 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 IRF6O14896 467 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 ADCY1Q08828 1119 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 TRIM68Q6AZZ1 485 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 COL23A1Q86Y22 540 aaPredicted RBP18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 FBXO25Q8TCJ0 367 aa18.24■□□□□ 0.51
PPP4R3A-202ENST00000554390 IFT74Q96LB3 600 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms