RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 FAM53CQ9NYF3 392 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF70Q9UC06 446 aaPredicted RBP6.7□□□□□ -1.34
VPS33B-203ENST00000554264 PCDHAC2Q9Y5I4 1007 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 NR2E3Q9Y5X4 410 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 SALL1Q9NSC2 1324 aa6.7□□□□□ -1.34
VPS33B-203ENST00000554264 TMEM265A0A087WTH1 108 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 ANKRD18BA2A2Z9 1011 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 CSF1RP07333 972 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 RAG1P15918 1043 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 CAPN2P17655 700 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 U2AF2P26368 475 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS33B-203ENST00000554264 ETV3P41162 512 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 GP2P55259 537 aaKnown RBP6.69□□□□□ -1.34
VPS33B-203ENST00000554264 SLC20A2Q08357 652 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 VGLL4Q14135 290 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 GCKRQ14397 625 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 CDKAL1Q5VV42 579 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 Q6ZUG5 572 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 FERMT3Q86UX7 667 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 TMEM192Q8IY95 271 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 MFSD4AQ8N468 514 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 NSUN7Q8NE18 718 aaKnown RBP6.69□□□□□ -1.34
VPS33B-203ENST00000554264 PGBD1Q96JS3 809 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 TEPSINQ96N21 525 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 ARHGAP39Q9C0H5 1083 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 BICC1Q9H694 974 aaKnown RBP6.69□□□□□ -1.34
VPS33B-203ENST00000554264 CCSER2Q9H7U1 834 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 VAV3Q9UKW4 847 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 INPP5FQ9Y2H2 1132 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 SNX11Q9Y5W9 270 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 FPGT-TNNI3KV9GXZ4 949 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 IRS2Q9Y4H2 1338 aa6.69□□□□□ -1.34
VPS33B-203ENST00000554264 PTPDC1A2A3K4 754 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 EFCAB8A8MWE9 144 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 BTBD19C9JJ37 291 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 TNFRSF10CO14798 259 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 CIAO1O76071 339 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 GJB1P08034 283 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 CPA1P15085 419 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 H2AFXP16104 143 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 CMA1P23946 247 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 GBP1P32455 592 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 IL15P40933 162 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 ME1P48163 572 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 UBXN2AP68543 259 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 CCZ1BP86790 482 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 CCZ1P86791 482 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 EXOSC10Q01780 885 aaKnown RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SNAPC2Q13487 334 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SF3A1Q15459 793 aaKnown RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 TERF2Q15554 542 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 ZNF746Q6NUN9 644 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 CPLX2Q6PUV4 134 aaKnown RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 UBE2Q1Q7Z7E8 422 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 VSIG10LQ86VR7 867 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 ERO1BQ86YB8 467 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 C17orf53Q8N3J3 647 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 MSL3Q8N5Y2 521 aaKnown RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 FSIP1Q8NA03 581 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 RBBP8NLQ8NC74 664 aaPredicted RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 RAET1EQ8TD07 263 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SHISA4Q96DD7 197 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 HOOK2Q96ED9 719 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SUCLG2Q96I99 432 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 FERD3LQ96RJ6 166 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SDF4Q9BRK5 362 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 PRO3102Q9H379 93 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 TDRD3Q9H7E2 651 aaKnown RBP6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SRRDQ9UH36 339 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 DNAI1Q9UI46 699 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 SLC5A6Q9Y289 635 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 ECM29Q5VYK3 1845 aa6.68□□□□□ -1.34
VPS33B-203ENST00000554264 TRIOBPQ9H2D6 2365 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 FAM237AA0A1B0GTK4 181 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 TCP10L2B9ZVM9 353 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 H3BS24 57 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 PPP6R2O75170 966 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 FARP2O94887 1054 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 SLC3A2P08195 630 aaKnown RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 CYP21A2P08686 494 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 CYP7A1P22680 504 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 PSMC4P43686 418 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 CASP7P55210 303 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 SCRN1Q12765 414 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 LRMPQ12912 555 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 IFIT5Q13325 482 aaKnown RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 PPIL2Q13356 520 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 STK38Q15208 465 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 ZYXQ15942 572 aaKnown RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 CCDC158Q5M9N0 1113 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 MFSD14BQ5SR56 506 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 FBXW10Q5XX13 1052 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 TMCO3Q6UWJ1 677 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 C17orf99Q6UX52 265 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 SYNE3Q6ZMZ3 975 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 LSRQ86X29 649 aaPredicted RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 DHX40Q8IX18 779 aaKnown RBP6.67□□□□□ -1.34
VPS33B-203ENST00000554264 ABI1Q8IZP0 508 aa6.67□□□□□ -1.34
VPS33B-203ENST00000554264 TXLNBQ8N3L3 684 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms