RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CCDC60Q8IWA6 550 aaPredicted RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 HSCBQ8IWL3 235 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 ABI1Q8IZP0 508 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 VPS52Q8N1B4 723 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 CMASQ8NFW8 434 aaPredicted RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 BORCS6Q96GS4 357 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 MRPL9Q9BYD2 267 aaKnown RBP8.71□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF302Q9NR11 478 aa8.71□□□□□ -1.02
ABCD4-220ENST00000553998 KMT2BQ9UMN6 2715 aaPredicted RBP8.7□□□□□ -1.02
ABCD4-220ENST00000553998 MAGEB2O15479 319 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 LILRB3O75022 631 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 VTNP04004 478 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 FDPSP14324 419 aaKnown RBP8.7□□□□□ -1.02
ABCD4-220ENST00000553998 BCAR1P56945 870 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 TYW1BQ6NUM6 668 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 SWSAP1Q6NVH7 229 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 MIS18BP1Q6P0N0 1132 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 TMC5Q6UXY8 1006 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 CYP26C1Q6V0L0 522 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 CCDC149Q6ZUS6 474 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 SIX5Q8N196 739 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 FEZF2Q8TBJ5 459 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 BICD2Q8TD16 824 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 CRYGNQ8WXF5 182 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 NXPE3Q969Y0 559 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 TMEM169Q96HH4 297 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 IGSF21Q96ID5 467 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 ZMYND12Q9H0C1 365 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 SFXN1Q9H9B4 322 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 C6orf50Q9HD87 102 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 RIC8AQ9NPQ8 531 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 CHST12Q9NRB3 414 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 DLGAP2Q9P1A6 1054 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 STK39Q9UEW8 545 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 CEP131Q9UPN4 1083 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 MYH9P35579 1960 aaKnown RBP8.7□□□□□ -1.02
ABCD4-220ENST00000553998 EVPLQ92817 2033 aa8.7□□□□□ -1.02
ABCD4-220ENST00000553998 FNDC1Q4ZHG4 1894 aaPredicted RBP8.69□□□□□ -1.02
ABCD4-220ENST00000553998 IGLV3-22A0A075B6J6 115 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.69□□□□□ -1.02
ABCD4-220ENST00000553998 KRBA1A5PL33 1030 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 SMCO2A6NFE2 343 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 NT5C1B-RDH14C9J2C7 533 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 BACH1O14867 736 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 JAK2O60674 1132 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 N4BP1O75113 896 aaKnown RBP8.69□□□□□ -1.02
ABCD4-220ENST00000553998 GALTP07902 379 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 CYP3A4P08684 503 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 SREBF1P36956 1147 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 CLK2P49760 499 aaKnown RBP8.69□□□□□ -1.02
ABCD4-220ENST00000553998 CLCN4P51793 760 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 ADCY7P51828 1080 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 NLRP11P59045 1033 aaKnown RBP8.69□□□□□ -1.02
ABCD4-220ENST00000553998 NLRP5P59047 1200 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 AP3B2Q13367 1082 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 PTPN14Q15678 1187 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 LETM2Q2VYF4 491 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 CABP7Q86V35 215 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 TMEM173Q86WV6 379 aaPredicted RBP8.69□□□□□ -1.02
ABCD4-220ENST00000553998 KIAA2013Q8IYS2 634 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 FAM184AQ8NB25 1140 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 SUMF1Q8NBK3 374 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 DAGLBQ8NCG7 672 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 HELQQ8TDG4 1101 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 AUTS2Q8WXX7 1259 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 RUBCNQ92622 972 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 DACT1Q9NYF0 836 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 VPS54Q9P1Q0 977 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 EPS15L1Q9UBC2 864 aa8.69□□□□□ -1.02
ABCD4-220ENST00000553998 FAM86B1E9PN63 330 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 NARSO43776 548 aaKnown RBP8.68□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF623O75123 536 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 C1RP00736 705 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 FAM86B2P0C5J1 330 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 SP9P0CG40 484 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 DARSP14868 501 aaKnown RBP8.68□□□□□ -1.02
ABCD4-220ENST00000553998 TMOD1P28289 359 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 GPC3P51654 580 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 CDC42EP1Q00587 391 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 TRIM29Q14134 588 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 ZNF746Q6NUN9 644 aaPredicted RBP8.68□□□□□ -1.02
ABCD4-220ENST00000553998 EFCAB12Q6NXP0 572 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 ZC3H14Q6PJT7 736 aaKnown RBP8.68□□□□□ -1.02
ABCD4-220ENST00000553998 SMAP1Q8IYB5 467 aaPredicted RBP8.68□□□□□ -1.02
ABCD4-220ENST00000553998 SLC44A3Q8N4M1 653 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 METTL13Q8N6R0 699 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 KCNG4Q8TDN1 519 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 BCL7CQ8WUZ0 217 aaPredicted RBP8.68□□□□□ -1.02
ABCD4-220ENST00000553998 KLHL5Q96PQ7 755 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 PPP1R16BQ96T49 567 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 PHF20Q9BVI0 1012 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 VN1R3Q9BXE9 311 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 ANO3Q9BYT9 981 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 NRDE2Q9H7Z3 1164 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 BRMS1Q9HCU9 246 aa8.68□□□□□ -1.02
ABCD4-220ENST00000553998 WDR6Q9NNW5 1121 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms