RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 ZNF507Q8TCN5 953 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 BSNDQ8WZ55 320 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 P2RX5Q93086 422 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 PRIMPOLQ96LW4 560 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 GCOM2Q9BZD3 368 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 C11orf49Q9H6J7 331 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 TYW1Q9NV66 732 aaKnown RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 PRMT7Q9NVM4 692 aaPredicted RBP15.95■□□□□ 0.14
SHMT2-210ENST00000553950 CTNND2Q9UQB3 1225 aa15.95■□□□□ 0.14
SHMT2-210ENST00000553950 GRIN2DO15399 1336 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 BECN2A8MW95 431 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 GOLGA6L19H0YKK7 550 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 K7ERI5 159 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 IKBKBO14920 756 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 CALUO43852 315 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 MYBP10242 640 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 COL6A1P12109 1028 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 SFPQP23246 707 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 CCNE1P24864 410 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 PTENP60484 403 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 MRPS6P82932 125 aaKnown RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 DRP2Q13474 957 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 SNX17Q15036 470 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 TPD52L1Q16890 204 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 EDRF1Q3B7T1 1238 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 KLHL10Q6JEL2 608 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 FAM43BQ6ZT52 329 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 APBB1IPQ7Z5R6 666 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 NECAB2Q7Z6G3 386 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 SYCP3Q8IZU3 236 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 SCFD1Q8WVM8 642 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 NELFBQ8WX92 580 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 HPS3Q969F9 1004 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 STRA6Q9BX79 667 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 SENP6Q9GZR1 1112 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-210ENST00000553950 GBP3Q9H0R5 595 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 TBX20Q9UMR3 447 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 TRPV2Q9Y5S1 764 aa15.94■□□□□ 0.14
SHMT2-210ENST00000553950 PPP1R3GB7ZBB8 358 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 PDXKO00764 312 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 ERLIN2O94905 339 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 VTNP04004 478 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 SRGAP2CP0DJJ0 459 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 CASP5P51878 434 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 CRYBB1P53674 252 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 NLRP11P59045 1033 aaKnown RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 RBL2Q08999 1139 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 NCBP1Q09161 790 aaKnown RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 BFSP2Q13515 415 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 CENPPQ6IPU0 288 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 ZPBP2Q6X784 338 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 RUFY4Q6ZNE9 571 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 C11orf57Q6ZUT1 292 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 ENOX1Q8TC92 643 aaKnown RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 NOC3LQ8WTT2 800 aaKnown RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 DNAJB3Q8WWF6 145 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 BICD1Q96G01 975 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 MRPL4Q9BYD3 311 aaKnown RBP15.93■□□□□ 0.14
SHMT2-210ENST00000553950 ADGRA3Q8IWK6 1321 aa15.93■□□□□ 0.14
SHMT2-210ENST00000553950 DCDC2CA8MYV0 355 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 INO80B-WBP1J3KQ70 363 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 HNRNPDLO14979 420 aaKnown RBP15.92■□□□□ 0.14
SHMT2-210ENST00000553950 KIAA0391O15091 583 aaKnown RBP15.92■□□□□ 0.14
SHMT2-210ENST00000553950 PIGRP01833 764 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 PRKCBP05771 671 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 RPL13P26373 211 aaKnown RBP15.92■□□□□ 0.14
SHMT2-210ENST00000553950 CDK7P50613 346 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 NFIL3Q16649 462 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 FAM187BQ17R55 369 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 ANKRD33Q7Z3H0 272 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 FAM114A1Q8IWE2 563 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 FAM126BQ8IXS8 530 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 TOX2Q96NM4 488 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 KIFC3Q9BVG8 833 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 CCDC113Q9H0I3 377 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 TRAF3IP3Q9Y228 551 aa15.92■□□□□ 0.14
SHMT2-210ENST00000553950 ZMYM2Q9UBW7 1377 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 A0A087WZ62 844 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 B4GALT4O60513 344 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 PRPF6O94906 941 aaKnown RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 PARNO95453 639 aaKnown RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 CD44P16070 742 aaKnown RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 LIG4P49917 911 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 ZNF200P98182 395 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 MBTD1Q05BQ5 628 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 MYBPC2Q14324 1141 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 HIC1Q14526 733 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 KIZQ2M2Z5 673 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 ZC2HC1CQ53FD0 456 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-210ENST00000553950 SLFN12LQ6IEE8 588 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 SLC39A5Q6ZMH5 540 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 NELFCDQ8IXH7 590 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 C12orf56Q8IXR9 622 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 AOPEPQ8N6M6 819 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 USP38Q8NB14 1042 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 TMEM174Q8WUU8 243 aa15.91■□□□□ 0.14
SHMT2-210ENST00000553950 ZBTB10Q96DT7 871 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms