RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ADRB1P08588 477 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 RXRAP19793 462 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 GNAQP50148 359 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 AFF1P51825 1210 aaKnown RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 TARBP2Q15633 366 aaKnown RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF746Q6NUN9 644 aaPredicted RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 MIS18BP1Q6P0N0 1132 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 RALYLQ86SE5 291 aaKnown RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF280BQ86YH2 543 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 METTL13Q8N6R0 699 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 LPPQ93052 612 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 LENG9Q96B70 501 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 ZNF668Q96K58 619 aaPredicted RBP10.29□□□□□ -0.76
PRKCH-208ENST00000553846 EPC1Q9H2F5 836 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 MAN1C1Q9NR34 630 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 MARCH5Q9NX47 278 aa10.29□□□□□ -0.76
PRKCH-208ENST00000553846 NOTCH4Q99466 2003 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 COL4A2P08572 1712 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 CARNS1A5YM72 827 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 SHISA7A6NL88 538 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 EDIL3O43854 480 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 RFPL2O75678 378 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 DDHD2O94830 711 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 CYP3A4P08684 503 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 ZSCAN20P17040 1043 aaPredicted RBP10.28□□□□□ -0.76
PRKCH-208ENST00000553846 LIFRP42702 1097 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
PRKCH-208ENST00000553846 ST3GAL2Q16842 350 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 NOMO2Q5JPE7 1267 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 SPECC1Q5M775 1068 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 VARS2Q5ST30 1063 aaKnown RBP10.28□□□□□ -0.76
PRKCH-208ENST00000553846 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 HEATR3Q7Z4Q2 680 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 PARD6AQ9NPB6 346 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 CHST12Q9NRB3 414 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 DACT1Q9NYF0 836 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 FBXO4Q9UKT5 387 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 AKT3Q9Y243 479 aa10.28□□□□□ -0.76
PRKCH-208ENST00000553846 IGKV6-21A0A0C4DH24 114 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 TEX28O15482 410 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 KINO60870 393 aaKnown RBP10.27□□□□□ -0.77
PRKCH-208ENST00000553846 STBD1O95210 358 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 FOSP01100 380 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-208ENST00000553846 IGHDP01880 384 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 TDGF1P13385 188 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 LAMP2P13473 410 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 KLRC2P26717 231 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 CA8P35219 290 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 AP3B2Q13367 1082 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 UGCGQ16739 394 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 KIAA0319Q5VV43 1072 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 DCLRE1AQ6PJP8 1040 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 GLB1LQ6UWU2 654 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 AGMOQ6ZNB7 445 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 PLA2G4DQ86XP0 818 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 SMAP1Q8IYB5 467 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-208ENST00000553846 MAP4K1Q92918 833 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 BORCS6Q96GS4 357 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 RPS6KC1Q96S38 1066 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 MAP7D2Q96T17 732 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 HINFPQ9BQA5 517 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
PRKCH-208ENST00000553846 HERC2P3Q9BVR0 1158 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 EMILIN2Q9BXX0 1053 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 RXFP1Q9HBX9 757 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 FAM105AQ9NUU6 356 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 STK39Q9UEW8 545 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 CEP131Q9UPN4 1083 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 SMG5Q9UPR3 1016 aaKnown RBP10.27□□□□□ -0.77
PRKCH-208ENST00000553846 MTF2Q9Y483 593 aaPredicted RBP10.27□□□□□ -0.77
PRKCH-208ENST00000553846 PCDHGA2Q9Y5H1 932 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 NUMBLQ9Y6R0 609 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 F5P12259 2224 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 IGF2RP11717 2491 aa10.27□□□□□ -0.77
PRKCH-208ENST00000553846 CCDC195A0A1B0GUA6 201 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 INPPL1O15357 1258 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 PRC1O43663 620 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 C1RP00736 705 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 SOD2P04179 222 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 OATP04181 439 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 CHMLP26374 656 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 GBP2P32456 591 aaPredicted RBP10.26□□□□□ -0.77
PRKCH-208ENST00000553846 PRKCEQ02156 737 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 LMNB2Q03252 620 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 NONOQ15233 471 aaKnown RBP eCLIP10.26□□□□□ -0.77
PRKCH-208ENST00000553846 B4GALNT3Q6L9W6 998 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 TAS1R1Q7RTX1 841 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 MRPL10Q7Z7H8 261 aaKnown RBP10.26□□□□□ -0.77
PRKCH-208ENST00000553846 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 RAB11FIP4Q86YS3 637 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 ZNF687Q8N1G0 1237 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 FANCBQ8NB91 859 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 STAMQ92783 540 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 FAM167AQ96KS9 214 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 TMEM175Q9BSA9 504 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 OSBPL6Q9BZF3 934 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 PRMT8Q9NR22 394 aaPredicted RBP10.26□□□□□ -0.77
PRKCH-208ENST00000553846 GABBR1Q9UBS5 961 aa10.26□□□□□ -0.77
PRKCH-208ENST00000553846 PCDHA10Q9Y5I2 948 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms