RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 FAM161BQ96MY7 647 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 TIPINQ9BVW5 301 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 RC3H2Q9HBD1 1191 aaKnown RBP13.15□□□□□ -0.3
TMEM253-202ENST00000553744 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
TMEM253-202ENST00000553744 DACT1Q9NYF0 836 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 KCND2Q9NZV8 630 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 CCDC39Q9UFE4 941 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 PIN4Q9Y237 131 aaKnown RBP13.15□□□□□ -0.3
TMEM253-202ENST00000553744 ATP6V1DQ9Y5K8 247 aa13.15□□□□□ -0.3
TMEM253-202ENST00000553744 TTC3P53804 2025 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 INO80B-WBP1J3KQ70 363 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 CUTAO60888 179 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 HIP1RO75146 1068 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 DGKIO75912 1065 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 ERLIN2O94905 339 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 IBSPP21815 317 aaPredicted RBP13.14□□□□□ -0.31
TMEM253-202ENST00000553744 KRT85P78386 507 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 FAM189BP81408 668 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 TAP1Q03518 808 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 MAPK7Q13164 816 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.14□□□□□ -0.31
TMEM253-202ENST00000553744 ZBTB8OSQ8IWT0 167 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 LARP4BQ92615 738 aaKnown RBP13.14□□□□□ -0.31
TMEM253-202ENST00000553744 ZNF689Q96CS4 500 aaPredicted RBP13.14□□□□□ -0.31
TMEM253-202ENST00000553744 IFT74Q96LB3 600 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 TRAIPQ9BWF2 469 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 C2orf40Q9H1Z8 148 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
TMEM253-202ENST00000553744 POLD4Q9HCU8 107 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 TMEM161AQ9NX61 479 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 LRFN2Q9ULH4 789 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 PCDHB7Q9Y5E2 793 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 PRUNE2Q8WUY3 3088 aa13.14□□□□□ -0.31
TMEM253-202ENST00000553744 ADGRA3Q8IWK6 1321 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 LINC01553A4QN01 128 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 TSPAN1O60635 241 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 AXLP30530 894 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 HOXA11P31270 313 aaPredicted RBP13.13□□□□□ -0.31
TMEM253-202ENST00000553744 NUCB2P80303 420 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 MCM6Q14566 821 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 AMHR2Q16671 573 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 ARSHQ5FYA8 562 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 AXDND1Q5T1B0 1012 aaPredicted RBP13.13□□□□□ -0.31
TMEM253-202ENST00000553744 RRAGBQ5VZM2 374 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
TMEM253-202ENST00000553744 CCDC73Q6ZRK6 1079 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 GPBP1Q86WP2 473 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 DEPTORQ8TB45 409 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 GUCD1Q96NT3 240 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 RCOR1Q9UKL0 485 aa13.13□□□□□ -0.31
TMEM253-202ENST00000553744 A0A087X0B3 334 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 A0A0U1RQF3 1178 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 ATF7P17544 494 aaPredicted RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 NCLP19338 710 aaKnown RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 NPTX2P47972 431 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 ME1P48163 572 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 RAB27AP51159 221 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 PEX3P56589 373 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 DMP1Q13316 513 aaPredicted RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 GRIN2CQ14957 1233 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 FAM187BQ17R55 369 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 NAALADL2Q58DX5 795 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 SHC4Q6S5L8 630 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 SPRED2Q7Z698 418 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 LEO1Q8WVC0 666 aaPredicted RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 CCDC51Q96ER9 411 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 CHAMP1Q96JM3 812 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 KIFC3Q9BVG8 833 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 CCDC113Q9H0I3 377 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 FZD8Q9H461 694 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 C17orf75Q9HAS0 396 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 PRMT7Q9NVM4 692 aaPredicted RBP13.12□□□□□ -0.31
TMEM253-202ENST00000553744 ODF2LQ9ULJ1 636 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 CHD9Q3L8U1 2897 aa13.12□□□□□ -0.31
TMEM253-202ENST00000553744 NPHP3-ACAD11A0A0J9YXS1 232 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 B4GALT5O43286 388 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 HOXA2O43364 376 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 EOMESO95936 686 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 PRKCBP05771 671 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 SKIP12755 728 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 PLS3P13797 630 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 ARF4P18085 180 aaPredicted RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 STAT6P42226 847 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 GATMP50440 423 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 EFNA5P52803 228 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 BTG3Q14201 252 aaPredicted RBP13.11□□□□□ -0.31
TMEM253-202ENST00000553744 MAPK6Q16659 721 aa13.11□□□□□ -0.31
TMEM253-202ENST00000553744 NOTUMQ6P988 496 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms