RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 BICRALQ6AI39 1079 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 MRM1Q6IN84 353 aaKnown RBP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 USP38Q8NB14 1042 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 WRNIP1Q96S55 665 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 GCM1Q9NP62 436 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 CD320Q9NPF0 282 aa7.48□□□□□ -1.21
ATXN3-223ENST00000553686 ZNF70Q9UC06 446 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-223ENST00000553686 TRBV23OR9-2A0A075B6M9 112 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 PPP1R11O60927 126 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-223ENST00000553686 CORO7P57737 925 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 FKBP1AP62942 108 aaKnown RBP7.47□□□□□ -1.21
ATXN3-223ENST00000553686 TMEM62Q0P6H9 643 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 NR1I3Q14994 352 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 AKNAD1Q5T1N1 836 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 PPM1EQ8WY54 764 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 COPS5Q92905 334 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 TEPSINQ96N21 525 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 ANKRD2Q9GZV1 360 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 CNTD2Q9H8S5 307 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 CD209Q9NNX6 404 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 CLEC1BQ9P126 229 aa7.47□□□□□ -1.21
ATXN3-223ENST00000553686 MBD1Q9UIS9 605 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-223ENST00000553686 ZNF646O15015 1829 aaPredicted RBP7.46□□□□□ -1.21
ATXN3-223ENST00000553686 TCP10L2B9ZVM9 353 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 KLF4O43474 513 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 COL6A1P12109 1028 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 PLS3P13797 630 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 KCNJ4P48050 445 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 LRRC26Q2I0M4 334 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 AAK1Q2M2I8 961 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 PAQR3Q6TCH7 311 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 RPTNQ6XPR3 784 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 FASTKD5Q7L8L6 764 aaKnown RBP7.46□□□□□ -1.22
ATXN3-223ENST00000553686 EEPD1Q7L9B9 569 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 LRRC56Q8IYG6 542 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-223ENST00000553686 BTN2A2Q8WVV5 523 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 ZKSCAN4Q969J2 545 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-223ENST00000553686 TMEM39BQ9GZU3 492 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 NKX2-4Q9H2Z4 354 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 TDRD3Q9H7E2 651 aaKnown RBP7.46□□□□□ -1.22
ATXN3-223ENST00000553686 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 PCDHAC2Q9Y5I4 1007 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 COL2A1P02458 1487 aaPredicted RBP7.46□□□□□ -1.22
ATXN3-223ENST00000553686 PFASO15067 1338 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 BDP1A6H8Y1 2624 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 PRUNE2Q8WUY3 3088 aa7.46□□□□□ -1.22
ATXN3-223ENST00000553686 CXCL11O14625 94 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 TBX1O43435 398 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 CYBBP04839 570 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 THBDP07204 575 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 CYP2C8P10632 490 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 HOXC12P31275 282 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 CC2D1BQ5T0F9 858 aaKnown RBP7.45□□□□□ -1.22
ATXN3-223ENST00000553686 TMC6Q7Z403 805 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 ZNF227Q86WZ6 799 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 CERS5Q8N5B7 392 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 LZTR1Q8N653 840 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 ZSCAN18Q8TBC5 510 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-223ENST00000553686 SMCR8Q8TEV9 937 aaPredicted RBP7.45□□□□□ -1.22
ATXN3-223ENST00000553686 GULP1Q9UBP9 304 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 RWDD3Q9Y3V2 267 aa7.45□□□□□ -1.22
ATXN3-223ENST00000553686 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-223ENST00000553686 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-223ENST00000553686 C7orf72A4D263 438 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 NPHS1O60500 1241 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 PCCAP05165 728 aaPredicted RBP7.44□□□□□ -1.22
ATXN3-223ENST00000553686 DBHP09172 617 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 IGHMBP2P38935 993 aaKnown RBP7.44□□□□□ -1.22
ATXN3-223ENST00000553686 MAPKAPK2P49137 400 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 LINC00310P59036 64 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 DDR2Q16832 855 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 USP33Q8TEY7 942 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 MMP19Q99542 508 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 ZNF341Q9BYN7 854 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 EPHX3Q9H6B9 360 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 BABAM1Q9NWV8 329 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 CNOT6Q9ULM6 557 aaKnown RBP7.44□□□□□ -1.22
ATXN3-223ENST00000553686 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
ATXN3-223ENST00000553686 NCOR1O75376 2440 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 ZC3H12DA2A288 527 aaKnown RBP7.43□□□□□ -1.22
ATXN3-223ENST00000553686 N4BP3O15049 544 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 SRGAP3O43295 1099 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
ATXN3-223ENST00000553686 SNRPB2P08579 225 aaKnown RBP7.43□□□□□ -1.22
ATXN3-223ENST00000553686 ECI1P42126 302 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 EPHB3P54753 998 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 CYP4F3Q08477 520 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 C9orf50Q5SZB4 431 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 ZC3H14Q6PJT7 736 aaKnown RBP7.43□□□□□ -1.22
ATXN3-223ENST00000553686 ZNF804AQ7Z570 1209 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 C1QL4Q86Z23 238 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 CCDC191Q8NCU4 936 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 FRS2Q8WU20 508 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 MZB1Q8WU39 189 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 CCDC140Q96MF4 163 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 SENP6Q9GZR1 1112 aaPredicted RBP7.43□□□□□ -1.22
ATXN3-223ENST00000553686 IRF2BPLQ9H1B7 796 aa7.43□□□□□ -1.22
ATXN3-223ENST00000553686 EPN3Q9H201 632 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms