RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 RNF187Q5TA31 235 aaPredicted RBP4.65□□□□□ -1.67
VRK1-202ENST00000553683 MFSD5Q6N075 450 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 Q6ZSN1 163 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 STRA8Q7Z7C7 330 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 SLC41A1Q8IVJ1 513 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 GLB1L2Q8IW92 636 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 RAX2Q96IS3 184 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 ORAI2Q96SN7 254 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 SPC25Q9HBM1 224 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 PRSS50Q9UI38 385 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 ST6GALNAC2Q9UJ37 374 aa4.65□□□□□ -1.67
VRK1-202ENST00000553683 A0A1W2PRX2 142 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 GPR39O43194 453 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 DNAJC6O75061 913 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 TOX4O94842 621 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 PCDH8O95206 1070 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 MTHFD2P13995 350 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 CANXP27824 592 aaKnown RBP4.64□□□□□ -1.67
VRK1-202ENST00000553683 STAT4Q14765 748 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 CDSNQ15517 529 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 C19orf54Q5BKX5 351 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 TAS1R1Q7RTX1 841 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 SPATS2Q86XZ4 545 aaKnown RBP4.64□□□□□ -1.67
VRK1-202ENST00000553683 LYSMD2Q8IV50 215 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 CMTM4Q8IZR5 234 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 ANKRD35Q8N283 1001 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 ANKRD53Q8N9V6 530 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 CLRN3Q8NCR9 226 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 OR14A2Q96R54 314 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 UIMC1Q96RL1 719 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 GPHA2Q96T91 129 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 AGO3Q9H9G7 860 aaKnown RBP4.64□□□□□ -1.67
VRK1-202ENST00000553683 DNAI1Q9UI46 699 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 MCM8Q9UJA3 840 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 PPP2R3BQ9Y5P8 575 aa4.64□□□□□ -1.67
VRK1-202ENST00000553683 RBM8AQ9Y5S9 174 aaKnown RBP4.64□□□□□ -1.67
VRK1-202ENST00000553683 A0A1W2PR48 441 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 GOLGA8BA8MQT2 603 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 ENPP1P22413 925 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 MRPS9P82933 396 aaKnown RBP4.63□□□□□ -1.67
VRK1-202ENST00000553683 FOXL1Q12952 345 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 ANO4Q32M45 955 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 METTL24Q5JXM2 366 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 LMBR1LQ6UX01 489 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 NECAB2Q7Z6G3 386 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 UBR7Q8N806 425 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 WDR66Q8TBY9 1149 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 TCF25Q9BQ70 676 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 MENTQ9BUN1 341 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 IL23AQ9NPF7 189 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.63□□□□□ -1.67
VRK1-202ENST00000553683 MAGEL2Q9UJ55 1249 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 PHLDB1Q86UU1 1377 aa4.63□□□□□ -1.67
VRK1-202ENST00000553683 LY86O95711 162 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 HNRNPLP14866 589 aaKnown RBP eCLIP4.62□□□□□ -1.67
VRK1-202ENST00000553683 ACO1P21399 889 aaKnown RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 CNGA1P29973 690 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 ID4P47928 161 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 SAFB2Q14151 953 aaKnown RBP eCLIP4.62□□□□□ -1.67
VRK1-202ENST00000553683 SPIDRQ14159 915 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 PDCD1Q15116 288 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 UGT8Q16880 541 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 PITRM1Q5JRX3 1037 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 KRT40Q6A162 431 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 IQSEC1Q6DN90 963 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 ZNF585AQ6P3V2 769 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 FAM111BQ6SJ93 734 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 HDGFL2Q7Z4V5 671 aaPredicted RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 THEMISQ8N1K5 641 aaPredicted RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 LMBR1Q8WVP7 490 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 MIEF2Q96C03 454 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 ADOQ96SZ5 270 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 PDCD2LQ9BRP1 358 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 FDXACB1Q9BRP7 624 aaPredicted RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 ANO3Q9BYT9 981 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 ENKD1Q9H0I2 346 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 PUS7LQ9H0K6 701 aaKnown RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 ZNF703Q9H7S9 590 aaPredicted RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 TOPORSQ9NS56 1045 aaPredicted RBP4.62□□□□□ -1.67
VRK1-202ENST00000553683 USP18Q9UMW8 372 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 CDY2AQ9Y6F7 541 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 SBNO2Q9Y2G9 1366 aa4.62□□□□□ -1.67
VRK1-202ENST00000553683 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 ALDH1A2O94788 518 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 GASTP01350 101 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 LTA4HP09960 611 aaKnown RBP4.61□□□□□ -1.67
VRK1-202ENST00000553683 POU3F3P20264 500 aaPredicted RBP4.61□□□□□ -1.67
VRK1-202ENST00000553683 ACRV1P26436 265 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 MSX2P35548 267 aaPredicted RBP4.61□□□□□ -1.67
VRK1-202ENST00000553683 NPEPPSP55786 919 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 CD69Q07108 199 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 PPARAQ07869 468 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 GAREM2Q75VX8 874 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 D2HGDHQ8N465 521 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 SSH1Q8WYL5 1049 aa4.61□□□□□ -1.67
VRK1-202ENST00000553683 RPL10LQ96L21 214 aaKnown RBP4.61□□□□□ -1.67
VRK1-202ENST00000553683 HECAQ9UBI9 543 aaPredicted RBP4.61□□□□□ -1.67
VRK1-202ENST00000553683 EVLQ9UI08 416 aaPredicted RBP4.61□□□□□ -1.67
VRK1-202ENST00000553683 RCAN3Q9UKA8 241 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms