RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 HIP1O00291 1037 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 MEIS1O00470 390 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 C2CD2LO14523 706 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 ADH1AP07327 375 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 GPC3P51654 580 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 UBXN2BQ14CS0 331 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 GET4Q7L5D6 327 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-204ENST00000553605 LRRC71Q8N4P6 559 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 SRBD1Q8N5C6 995 aaKnown RBP15.66■□□□□ 0.1
PRPF39-204ENST00000553605 LINC01465Q8N7H1 131 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 NETO1Q8TDF5 533 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 SCLT1Q96NL6 688 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 MYL10Q9BUA6 226 aa15.66■□□□□ 0.1
PRPF39-204ENST00000553605 RPP25Q9BUL9 199 aaKnown RBP15.66■□□□□ 0.1
PRPF39-204ENST00000553605 SH2B1Q9NRF2 756 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-204ENST00000553605 MAFBQ9Y5Q3 323 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-204ENST00000553605 MIA3Q5JRA6 1907 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 DOCK8Q8NF50 2099 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 CSDE1O75534 798 aaKnown RBP15.65■□□□□ 0.1
PRPF39-204ENST00000553605 OFD1O75665 1012 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 PLEKHA8P1O95397 391 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 GLUD1P00367 558 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 ALDH2P05091 517 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 SKIP12755 728 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 MAGEA9P43362 315 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 GNAQP50148 359 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 AK2P54819 239 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 PRKCQQ04759 706 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 SPEM2Q0P670 501 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 SLC44A4Q53GD3 710 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 TSSK4Q6SA08 328 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 RALYLQ86SE5 291 aaKnown RBP15.65■□□□□ 0.1
PRPF39-204ENST00000553605 ZNF280BQ86YH2 543 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 CMTR1Q8N1G2 835 aaKnown RBP15.65■□□□□ 0.1
PRPF39-204ENST00000553605 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 ZNF707Q96C28 371 aaPredicted RBP15.65■□□□□ 0.1
PRPF39-204ENST00000553605 RPS6KC1Q96S38 1066 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 TRAIPQ9BWF2 469 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 ANGPTL2Q9UKU9 493 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 SSX2IPQ9Y2D8 614 aa15.65■□□□□ 0.1
PRPF39-204ENST00000553605 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.65■□□□□ 0.1
PRPF39-204ENST00000553605 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.64■□□□□ 0.09
PRPF39-204ENST00000553605 hCG_1642624A0A1W2PR95 340 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 MEIS3P2A8K0S8 358 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 TEX28O15482 410 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 DHX15O43143 795 aaKnown RBP15.64■□□□□ 0.09
PRPF39-204ENST00000553605 B4GALT3O60512 393 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 URODP06132 367 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 ZNF76P36508 570 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 MLF2Q15773 248 aaPredicted RBP15.64■□□□□ 0.09
PRPF39-204ENST00000553605 TWF2Q6IBS0 349 aaKnown RBP15.64■□□□□ 0.09
PRPF39-204ENST00000553605 ZNF654Q8IZM8 581 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 NLRP7Q8WX94 980 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 PHKBQ93100 1093 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 PGBD1Q96JS3 809 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 NT5C3AQ9H0P0 336 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 LY9Q9HBG7 655 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 FAN1Q9Y2M0 1017 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 PATJQ8NI35 1801 aa15.64■□□□□ 0.09
PRPF39-204ENST00000553605 DDAH1O94760 285 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 DDHD2O94830 711 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 PAPLNO95428 1278 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 SOD2P04179 222 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 CYP21A2P08686 494 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 SPATA31D3P0C874 917 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 ACAP1Q15027 740 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 ZBTB41Q5SVQ8 909 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 PARM1Q6UWI2 310 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 SPATA31D4Q6ZUB0 917 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 NCOA7Q8NI08 942 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 HDAC7Q8WUI4 952 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 FGF14Q92915 247 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 LNPKQ9C0E8 428 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 LTB4R2Q9NPC1 389 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 RAB23Q9ULC3 237 aa15.63■□□□□ 0.09
PRPF39-204ENST00000553605 ZFP37Q9Y6Q3 630 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-204ENST00000553605 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
PRPF39-204ENST00000553605 FOSP01100 380 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-204ENST00000553605 CD72P21854 359 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 KCNA4P22459 653 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 RSPO2Q6UXX9 243 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-204ENST00000553605 NIPA1Q7RTP0 329 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 TAS1R1Q7RTX1 841 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 HEATR3Q7Z4Q2 680 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 URGCPQ8TCY9 931 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 FAM193BQ96PV7 902 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-204ENST00000553605 TMEM175Q9BSA9 504 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 FAM126AQ9BYI3 521 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-204ENST00000553605 GCOM2Q9BZD3 368 aaPredicted RBP15.62■□□□□ 0.09
PRPF39-204ENST00000553605 PLEKHA4Q9H4M7 779 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 FAM105AQ9NUU6 356 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 ZDHHC7Q9NXF8 308 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 GABBR1Q9UBS5 961 aa15.62■□□□□ 0.09
PRPF39-204ENST00000553605 COL4A3Q01955 1670 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 FAM208BQ5VWN6 2430 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 E7EWF7 191 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 IPO5O00410 1097 aaKnown RBP15.61■□□□□ 0.09
PRPF39-204ENST00000553605 NRP1O14786 923 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 NCAM2O15394 837 aa15.61■□□□□ 0.09
PRPF39-204ENST00000553605 GAS2O43903 313 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms