RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 FZD8Q9H461 694 aa16.4■□□□□ 0.22
MTHFD1-204ENST00000553405 OLFML3Q9NRN5 406 aa16.4■□□□□ 0.22
MTHFD1-204ENST00000553405 PADI3Q9ULW8 664 aa16.4■□□□□ 0.22
MTHFD1-204ENST00000553405 GINS2Q9Y248 185 aa16.4■□□□□ 0.22
MTHFD1-204ENST00000553405 LRRIQ4A6NIV6 560 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 TTLL13PA6NNM8 815 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 M0QZ92 97 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 FAM13AO94988 1023 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 KRT18P05783 430 aaKnown RBP16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 MAPTP10636 758 aaKnown RBP16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 FGFR4P22455 802 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 HOXA11P31270 313 aaPredicted RBP16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 PHKA2P46019 1235 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 COASYQ13057 564 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.213e-6■□□□□ 10.1
MTHFD1-204ENST00000553405 TFDP1Q14186 410 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 DSC3Q14574 896 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 FAM187BQ17R55 369 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 RASIP1Q5U651 963 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 UNC13DQ70J99 1090 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 DBF4BQ8NFT6 615 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 LRRC27Q9C0I9 530 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 ST6GALNAC4Q9H4F1 302 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 ST3GAL5Q9UNP4 418 aa16.39■□□□□ 0.21
MTHFD1-204ENST00000553405 MICAL3Q7RTP6 2002 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 PVALEFA0A1B0GWK0 134 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 SLC16A4O15374 487 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 MGEA5O60502 916 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 TBCAO75347 108 aaKnown RBP16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 RPS6KA5O75582 802 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 PFKMP08237 780 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 ACRP10323 421 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 GAP43P17677 238 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 CASP5P51878 434 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 ASIC1P78348 528 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 DMP1Q13316 513 aaPredicted RBP16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 PNOCQ13519 176 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 POSTNQ15063 836 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 TMEM240Q5SV17 173 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 ODR4Q5SWX8 454 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 DEFB128Q7Z7B8 93 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 RTN4RL1Q86UN2 441 aaPredicted RBP16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 MYCT1Q8N699 235 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 GLIS3Q8NEA6 775 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 HPS3Q969F9 1004 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 IFT74Q96LB3 600 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 IFIH1Q9BYX4 1025 aaKnown RBP16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 TMEM134Q9H6X4 195 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 KMT5AQ9NQR1 393 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 PANK4Q9NVE7 773 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 PTPRSQ13332 1948 aa16.38■□□□□ 0.21
MTHFD1-204ENST00000553405 B4GALT5O43286 388 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 TRAK2O60296 914 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 TSPAN1O60635 241 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 KINO60870 393 aaKnown RBP16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 NMT1P30419 496 aaKnown RBP16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 HOXD13P35453 343 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 SARSP49591 514 aaKnown RBP16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 GTF2BQ00403 316 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 PAK2Q13177 524 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 PCBP1Q15365 356 aaKnown RBP eCLIP16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 KANK3Q6NY19 840 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 CNKSR3Q6P9H4 555 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 ZNF720Q7Z2F6 126 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 CRIPAKQ8N1N5 446 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.37■□□□□ 0.211e-15■■■□□ 16.4
MTHFD1-204ENST00000553405 C2orf40Q9H1Z8 148 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 AGPAT5Q9NUQ2 364 aa16.37■□□□□ 0.21
MTHFD1-204ENST00000553405 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 CCDC169A6NNP5 214 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 ABLIM1O14639 778 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 IDEP14735 1019 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 EFNA5P52803 228 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 KMT5BQ4FZB7 885 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 HERC4Q5GLZ8 1057 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 C9orf50Q5SZB4 431 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 NT5DC1Q5TFE4 455 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 ZNF365Q70YC5 407 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 HAUS6Q7Z4H7 955 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 CCDC65Q8IXS2 484 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 RPUSD2Q8IZ73 545 aaKnown RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 SEPT8Q92599 483 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 PRIMPOLQ96LW4 560 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 SCLT1Q96NL6 688 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 LBHD1Q9BQE6 289 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 INO80BQ9C086 356 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 CLSTN2Q9H4D0 955 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 USP20Q9Y2K6 914 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 PHLPP2Q6ZVD8 1323 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 CNTNAP2Q9UHC6 1331 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 COL4A6Q14031 1691 aa16.36■□□□□ 0.21
MTHFD1-204ENST00000553405 DENND3A2RUS2 1198 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms