RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 ZBTB18Q99592 522 aa12.31□□□□□ -0.44
SYNE2-208ENST00000553289 KLHL8Q9P2G9 620 aaPredicted RBP12.31□□□□□ -0.44
SYNE2-208ENST00000553289 SUN2Q9UH99 717 aa12.31□□□□□ -0.44
SYNE2-208ENST00000553289 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 EYA4O95677 639 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SDC4P31431 198 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SNAP25P60880 206 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 TSTA3Q13630 321 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ELMSAN1Q6PJG2 1045 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SEPT12Q8IYM1 358 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 PRPF38AQ8NAV1 312 aaKnown RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 GRAMD1AQ96CP6 724 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 FAM213AQ9BRX8 229 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SUDS3Q9H7L9 328 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 FBXO2Q9UK22 296 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 TRIM33Q9UPN9 1127 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ZDHHC9Q9Y397 364 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ASAP2O43150 1006 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 HUS1O60921 280 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SPAG7O75391 227 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 CASP1P29466 404 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 TEDDM1Q5T9Z0 273 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ACAD11Q709F0 780 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ST13P4Q8IZP2 240 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 MRPL4Q9BYD3 311 aaKnown RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 F5H6K3 240 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ECE2O60344 883 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 MARK3P27448 753 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 STAT3P40763 770 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 OCRLQ01968 901 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 KLRC3Q07444 240 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SYDE1Q6ZW31 735 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 FBXL13Q8NEE6 735 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SLC10A4Q96EP9 437 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SNF8Q96H20 258 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 GCNAQ96QF7 691 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 KIF9Q9HAQ2 790 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 RNF146Q9NTX7 359 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 ZFXP17010 805 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 SLC1A1P43005 524 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 HNRNPH2P55795 449 aaKnown RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 IL1RL1Q01638 556 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 NBPF10Q6P3W6 841 aaKnown RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 CDKL3Q8IVW4 592 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-208ENST00000553289 TTC17Q96AE7 1141 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 FGD4Q96M96 766 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 C11orf70Q9BRQ4 267 aa12.3□□□□□ -0.44
SYNE2-208ENST00000553289 GYG2O15488 501 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 NMT2O60551 498 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 FTLP02792 175 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 GNA15P30679 374 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 Q3C1V9 767 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 SLC27A3Q5K4L6 730 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 SNRNP48Q6IEG0 339 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 GPD1LQ8N335 351 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 TRIM62Q9BVG3 475 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 PIM2Q9P1W9 311 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 POTEFA5A3E0 1075 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 APOEP02649 317 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 POTEIP0CG38 1075 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 KCNQ4P56696 695 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 POTEGQ6S5H5 508 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 POTEEQ6S8J3 1075 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 ATP6V1G3Q96LB4 118 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 GPR101Q96P66 508 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 CENPKQ9BS16 269 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 QRICH2Q9H0J4 1663 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 CDC42BPAQ5VT25 1732 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 TEX33O43247 280 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 TADA3O75528 432 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 PEX19P40855 299 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 MAGOHP61326 146 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 SBK1Q52WX2 424 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 NFRKBQ6P4R8 1299 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 MMS22LQ6ZRQ5 1243 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 TBC1D1Q86TI0 1168 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 RPAINQ86UA6 219 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 APOBEC3FQ8IUX4 373 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 KCTD17Q8N5Z5 321 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 ATP11CQ8NB49 1132 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 EIF2AK1Q9BQI3 630 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 LXNQ9BS40 222 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 RAVER2Q9HCJ3 691 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 SENP1Q9P0U3 644 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 KIF28PB7ZC32 967 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 CHUKO15111 745 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 ELF1P32519 619 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 ITPRIPL1Q6GPH6 555 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 TDRD3Q9H7E2 651 aaKnown RBP12.29□□□□□ -0.44
SYNE2-208ENST00000553289 FIS1Q9Y3D6 152 aa12.29□□□□□ -0.44
SYNE2-208ENST00000553289 A0A0G2JND7 137 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms