RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 TTC3P53804 2025 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 A0A0U1RQF3 1178 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 LINC01553A4QN01 128 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 TTLL13PA6NNM8 815 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 CUTAO60888 179 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 HIP1RO75146 1068 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 SFPQP23246 707 aaKnown RBP eCLIP11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 PHKA2P46019 1235 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 STK38Q15208 465 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 PCBP1Q15365 356 aaKnown RBP eCLIP11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 TAS1R3Q7RTX0 852 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 ECHDC2Q86YB7 292 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 MYOCDQ8IZQ8 938 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 KCNG4Q8TDN1 519 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 LEO1Q8WVC0 666 aaPredicted RBP11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 KIFAP3Q92845 792 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 INO80BQ9C086 356 aaPredicted RBP11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 SEMA6BQ9H3T3 888 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 MTMR10Q9NXD2 777 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 ARHGAP28Q9P2N2 729 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 PCDHA7Q9UN72 937 aa11.21□□□□□ -0.61
CALCOCO1-222ENST00000553154 CNTNAP2Q9UHC6 1331 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 LOXHD1Q8IVV2 1947 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 FAM237AA0A1B0GTK4 181 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 EPOPA6NHQ4 379 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 B4GALT5O43286 388 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 TLL1O43897 1013 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 ZNF623O75123 536 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 TFDP1Q14186 410 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 MCM6Q14566 821 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 FOXD4L6Q3SYB3 417 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 FAM102BQ5T8I3 360 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 RESP18Q5W5W9 173 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 FOXD4L3Q6VB84 417 aaPredicted RBP11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 MAEAQ7L5Y9 396 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 SPIRE2Q8WWL2 714 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 LARP4BQ92615 738 aaKnown RBP11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 CALML4Q96GE6 196 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 CCDC43Q96MW1 224 aaKnown RBP11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 REEP2Q9BRK0 252 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 KIFC3Q9BVG8 833 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 ZNF576Q9H609 170 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 C17orf75Q9HAS0 396 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 POLD4Q9HCU8 107 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 TMEM161AQ9NX61 479 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 INSL6Q9Y581 213 aa11.2□□□□□ -0.62
CALCOCO1-222ENST00000553154 NPHP3-ACAD11A0A0J9YXS1 232 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 FRMD3A2A2Y4 597 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 ABLIM1O14639 778 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 INPPL1O15357 1258 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 ARF4P18085 180 aaPredicted RBP11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 NPTX2P47972 431 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 GATMP50440 423 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 ERVK-21P61565 698 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 GIT2Q14161 759 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 GRIN2CQ14957 1233 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 CLLU1OSQ5K130 101 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 ZNF697Q5TEC3 545 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 CATSPER4Q7RTX7 472 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 MRPL10Q7Z7H8 261 aaKnown RBP11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 CMTR2Q8IYT2 770 aaKnown RBP11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 CLP1Q92989 425 aaKnown RBP11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 DNAJC19Q96DA6 116 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 CCDC51Q96ER9 411 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 CDK5RAP3Q96JB5 506 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 PRIMPOLQ96LW4 560 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 DRC1Q96MC2 740 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 SCLT1Q96NL6 688 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 DAXXQ9UER7 740 aaPredicted RBP11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 MSRAQ9UJ68 235 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 ODF2LQ9ULJ1 636 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 PIN4Q9Y237 131 aaKnown RBP11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 HPSEQ9Y251 543 aa11.19□□□□□ -0.62
CALCOCO1-222ENST00000553154 COL4A4P53420 1690 aaPredicted RBP11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 PHLPP2Q6ZVD8 1323 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 A0A1B0GUA9 196 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 DENND3A2RUS2 1198 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 LRRIQ4A6NIV6 560 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 MEIS3P2A8K0S8 358 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 LPXNO60711 386 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 PLS3P13797 630 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 AXLP30530 894 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 NCKAP1LP55160 1127 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 KRT85P78386 507 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 NUCB2P80303 420 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 ADGRE1Q14246 886 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 PPP2R5AQ15172 486 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 ZRSR1Q15695 479 aaKnown RBP11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 FAM117BQ6P1L5 589 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 CNNM4Q6P4Q7 775 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 SMG8Q8ND04 991 aaKnown RBP11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 TMEM161BQ8NDZ6 487 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 C2orf40Q9H1Z8 148 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 FAM105AQ9NUU6 356 aa11.18□□□□□ -0.62
CALCOCO1-222ENST00000553154 KBTBD4Q9NVX7 518 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms