RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 STK24Q9Y6E0 443 aa20.85■□□□□ 0.93
HDAC4-217ENST00000553145 TSPAN1O60635 241 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 AMHR2Q16671 573 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 UBXN11Q5T124 520 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 FAM173BQ6P4H8 233 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 HELQQ8TDG4 1101 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 LPPQ93052 612 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 PNMA5Q96PV4 448 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 PLVAPQ9BX97 442 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 POLD4Q9HCU8 107 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 FAM105AQ9NUU6 356 aa20.84■□□□□ 0.93
HDAC4-217ENST00000553145 REV3LO60673 3130 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 MEIS3P2A8K0S8 358 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 INO80B-WBP1J3KQ70 363 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 HOXA2O43364 376 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 EOMESO95936 686 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 ITGB1P05556 798 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 SF3A1Q15459 793 aaKnown RBP20.83■□□□□ 0.93
HDAC4-217ENST00000553145 SKIV2LQ15477 1246 aaKnown RBP20.83■□□□□ 0.93
HDAC4-217ENST00000553145 LONRF3Q496Y0 759 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 KLHL23Q8NBE8 558 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 P2RX5Q93086 422 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 NFKBIZQ9BYH8 718 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 ALG13Q9NP73 1137 aaKnown RBP20.83■□□□□ 0.93
HDAC4-217ENST00000553145 THEGQ9P2T0 379 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 PLAGL2Q9UPG8 496 aa20.83■□□□□ 0.93
HDAC4-217ENST00000553145 LRRIQ4A6NIV6 560 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 ERLIN2O94905 339 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 EYA4O95677 639 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 DNAJB1P25685 340 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 GRIN1Q05586 938 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 PTPROQ16827 1216 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 HYIQ5T013 277 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 SPOUT1Q5T280 376 aaKnown RBP20.82■□□□□ 0.92
HDAC4-217ENST00000553145 HSCBQ8IWL3 235 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 ABI1Q8IZP0 508 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 CPB2Q96IY4 423 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 CLIC4Q9Y696 253 aa20.82■□□□□ 0.92
HDAC4-217ENST00000553145 PLXNA4Q9HCM2 1894 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 B4GALT5O43286 388 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 ZNF623O75123 536 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 CSPG5O95196 566 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 RAB27AP51159 221 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 CAMK1Q14012 370 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 ZRSR1Q15695 479 aaKnown RBP20.81■□□□□ 0.92
HDAC4-217ENST00000553145 CDCA2Q69YH5 1023 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-217ENST00000553145 LRRC43Q8N309 656 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 SPPL3Q8TCT6 385 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 PLIN2Q99541 437 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 PCDHB2Q9Y5E7 798 aa20.81■□□□□ 0.92
HDAC4-217ENST00000553145 UNC80Q8N2C7 3258 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 STX6O43752 255 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 BMP15O95972 392 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 SKIP12755 728 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 ARF4P18085 180 aaPredicted RBP20.8■□□□□ 0.92
HDAC4-217ENST00000553145 PTPAQ15257 358 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 PCBP1Q15365 356 aaKnown RBP eCLIP20.8■□□□□ 0.92
HDAC4-217ENST00000553145 NAALADL2Q58DX5 795 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 RUSC1Q9BVN2 902 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 EIF2AQ9BY44 585 aaKnown RBP20.8■□□□□ 0.92
HDAC4-217ENST00000553145 LMAN2LQ9H0V9 348 aa20.8■□□□□ 0.92
HDAC4-217ENST00000553145 LAG3P18627 525 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 AXLP30530 894 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 PBX3P40426 434 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 TFF2Q03403 129 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 TMEM119Q4V9L6 283 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 TIGD5Q53EQ6 642 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 TCEAL5Q5H9L2 206 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 AGMOQ6ZNB7 445 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 MRPL10Q7Z7H8 261 aaKnown RBP20.79■□□□□ 0.92
HDAC4-217ENST00000553145 CABP7Q86V35 215 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 SMG8Q8ND04 991 aaKnown RBP20.79■□□□□ 0.92
HDAC4-217ENST00000553145 LRRC15Q8TF66 581 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 KIFC3Q9BVG8 833 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 PCDHB12Q9Y5F1 795 aa20.79■□□□□ 0.92
HDAC4-217ENST00000553145 TTLL13PA6NNM8 815 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 EDN1P05305 212 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 NAMPTP43490 491 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 RINT1Q6NUQ1 792 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 NOTUMQ6P988 496 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 PPP4R3CPQ6ZMV5 832 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 C1orf186Q6ZWK4 172 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 CDR2LQ86X02 465 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-217ENST00000553145 DAW1Q8N136 415 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 POF1BQ8WVV4 589 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 ATXN2LQ8WWM7 1075 aaKnown RBP20.78■□□□□ 0.92
HDAC4-217ENST00000553145 AK8Q96MA6 479 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 CSRNP2Q9H175 543 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 NSUN3Q9H649 340 aaKnown RBP20.78■□□□□ 0.92
HDAC4-217ENST00000553145 AAASQ9NRG9 546 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 INPP5FQ9Y2H2 1132 aa20.78■□□□□ 0.92
HDAC4-217ENST00000553145 OFD1O75665 1012 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 FGF18O76093 207 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 NCLP19338 710 aaKnown RBP20.77■□□□□ 0.92
HDAC4-217ENST00000553145 IRS1P35568 1242 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 AFF1P51825 1210 aaKnown RBP20.77■□□□□ 0.92
HDAC4-217ENST00000553145 MAPK7Q13164 816 aa20.77■□□□□ 0.92
HDAC4-217ENST00000553145 KCNT2Q6UVM3 1135 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms